Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_0841 |
Symbol | |
ID | 8648351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | - |
Start bp | 906257 |
End bp | 907126 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | type II secretion system protein |
Protein accession | YP_003325433 |
Protein GI | 269955644 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0187037 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCCGC AGCTCGCCGA CCCGCTGCTG CCCGGCCTCT TCGGCGCGCT CGTCGCCGTC GGGCTGTTCC TCGTCGTGTG GGGGTACGTC CCGCGGCCCG AGGGGGTACG TACCTCCGTT GGCCGGACGT CCCCCCTCGG GCGGGTCACG CACCGCACCT GGGTACTGGC CGGTGCGGGG CTCGCGGCCG GTGTCGTCGT GTGGGCGTTC ACGCACTGGG TCCTTGCCGT CGTCGTCGCG CCGATCGCCG CGCTCGGGCT GCCGTCCCTC CTGACCGCGG CGCCGGCCAA GGCACGGATC GCCAGGCTCG AGGCGCTCGA GGAGTGGACG CGGTCGCTGT CCGGCGTCCT GGTTGCCGGA GTCGGCCTGG AGCAGGCGCT CGTCTCGACG CTCCGCTCGG CGCCCACGGT GCTCGAGCCG CAGCTCCGGC TGCTGACCGC TCGCCTCAAC GCCCGCTGGT CCACCGAGGC CGCCCTGCGC GCGTTCGCCG ACGACCTCGA CGACGCGACG GGCGACCTCG TCGCCGCGAA CCTCATCCTC GCCGCCCGAC GTCGCGGCGC AGGGCTCGCC ACGGTGCTGG CGTCGCTGGC CGACTCCGTC GCCGCGGACG TGCGGTCGCG CCGGCAGATC GAGGCCGACC GGGCCAAGCC GCGCGCGACC GCGCGCTGGG TCACGATCAT CAGCGCCGGG GTGCTGCTGG TGCTGACGTT CTCCGGGCAG TACGTCCAGC CGTTCTCGAC GCCGCTGGGC CAGGTCGTCC TCGCGCTCCT GCTGGCCGCC TACGTCGCCA CCTTGGTGTG GCTCAAGCGG CTGTCGAACG GTGAGGAGGT CCCCCGCGTG ATGGGGGCGT CCGCCAGGGT TGCCCGATGA
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Protein sequence | MIPQLADPLL PGLFGALVAV GLFLVVWGYV PRPEGVRTSV GRTSPLGRVT HRTWVLAGAG LAAGVVVWAF THWVLAVVVA PIAALGLPSL LTAAPAKARI ARLEALEEWT RSLSGVLVAG VGLEQALVST LRSAPTVLEP QLRLLTARLN ARWSTEAALR AFADDLDDAT GDLVAANLIL AARRRGAGLA TVLASLADSV AADVRSRRQI EADRAKPRAT ARWVTIISAG VLLVLTFSGQ YVQPFSTPLG QVVLALLLAA YVATLVWLKR LSNGEEVPRV MGASARVAR
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