| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_0800 |
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| Symbol | |
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| ID | 8648310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylanimonas cellulosilytica DSM 15894 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013530 |
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| Strand | - |
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| Start bp | 871938 |
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| End bp | 873701 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | |
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| Product | Type IV secretory pathway VirD4 protein-like protein |
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| Protein accession | YP_003325396 |
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| Protein GI | 269955607 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACGA CAGCGCCGTC GGGCAACGAC TCCCTGACGA ACCTCGGCCT GATCCTCGTC
GGCGCCGCCA TCGGCATCGC GGGCGCGCTC CGTGTGGCCG GGAGCATCGC CGCCCGTCTG
GCCGGCACCC GGGCGCCTGA CGGCGGGCTC GAGGCCGGGC TGCGGGTCCT GGCCCAGGCC
GCCGCGCCCG CCGAAGCGCT CGACTCCCCC GGCCTGAGCC CGGTCCTGTA CTGGGCTGTC
GTCGCCGTGC TCCTGGCCGT CGTCGTGACC GCCGCGCTGA TGGTCTGGCG GTTCGTCGGG
CACCGTCGTC GTCGGAATGA CCCGCACCTC GCCGTCGGCA CCGCCACGCG GGCCGACGTC
GCCAAGACCG CGTCGGCGCG GGCGCTCGTC GCCCGCGCGA AGGACCTGCG CCCCTCGCTG
GCCACGCCGA CCCCGGCGGA CTTGGGCTAC CTCCTCGGGC GCTGCAACGG CAAGGAGGTC
TGGGCGTCGG TCGAGGACTC AATCCTCGTC CTCGGCCCGC CCCGCTCAGG CAAGGGCCTG
CACCTGGTCA TCAACGCGAT CCTCGACGCA CCCGGCGCCG TCGTGTCCAC CTCGACCCGG
CCCGACAACC TCGCCATCAC CATGACCGCC CGCGCCCGCC GTGGCCCTGT CGCGGTCTTC
GACCCGCAAC GCCTCGCGTC ATCGCTGCCG TCAGGGCTGC GGTGGTCGCC GTTGCGCGGG
TGCGAGGACC CCGAGACGGC GTCCATCAGG GCGGCCGGGT TCGCGGCGTC GACCGGGCTC
TCGCGCGGCG GCGGGGTGGA GTCCGGGTCG TTCTGGGAGG GCAAGGCGCG CACCGCGTTG
CAGGCGCTCC TGCACGCGGG GGCGCTCGGC GGGCGGGATG CCCGCGAGCT GTACACGTGG
TCGGTCAACG CCCCTGCCGC GGCCGACGCC GTAGCGATCC TGCACTCCCA CCCCGACGCC
GCGCCCGGCT GGGCCGAGTC GCTGGAGGCC ACAATCCACG CCGACCCGCG CACACGGGAG
TCCGTCTGGA TTGGCGTCGG GCAGGCACTG GCGTGCCTCG CCAACCCGGC GACACTCGAC
GCCGTGACCC CGCGGACGGG CGAGCACTTC TCGCCTGCCG AGTTCCTGCG GTCGAACGGG
ACGCTCTACC TGCTCGCGAC CGGCGCCGGA TCGAAGACCG TGTGGCCGCT CATCGCGGCC
TTCGTCGAGG ACCTCGTGCA AACGGCGTCG CGCTTGGCCG CCGCATCGCC CGGGTCGCGG
CTCGACCCGC CACTCCTGCT CTCGCTCGAC GAGATCGGCA ACCTCGCCCC ACTCCCCTCG
CTGCCGCACC TGATGTCCGA GGGCGGCGGA ACGGGGATCA CGACCATGCC CGTACTGCAG
TCACTGGAGC TTGCTCGGGA GAACTGGGGC CGTTCTGCGG CCGGAGCGAT CTGGGATGCC
GCAATCACGA AGGTGATCCT GGGCGGGTCG TCGTCCGCTG ACGATCTGCG GGCGCTGTCG
GCTCTCATCG GCGAACGTGA TGAGGTCGCG ACGTCCACAA CGATCGGCCC CGATGGGACG
CGCTCAACGC AACGGTCGAG CCGGCGGGTG CCGGTGCTGC CGCCGGAACA CATCCGCACC
CTGCCGTTCG GCGTGGGGCT CACACTGCTG CGGTCGACGT CGGCGCTCGT GACGGACCTG
CGGCCCTGGA CGGTGCGAGA CGACGTTGAT CGGCTGATGC AGGAGCGGGC GGCCACGGAG
ACCTTGCTCC GCCAGCCCTC GTGA
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| Protein sequence | MTTTAPSGND SLTNLGLILV GAAIGIAGAL RVAGSIAARL AGTRAPDGGL EAGLRVLAQA
AAPAEALDSP GLSPVLYWAV VAVLLAVVVT AALMVWRFVG HRRRRNDPHL AVGTATRADV
AKTASARALV ARAKDLRPSL ATPTPADLGY LLGRCNGKEV WASVEDSILV LGPPRSGKGL
HLVINAILDA PGAVVSTSTR PDNLAITMTA RARRGPVAVF DPQRLASSLP SGLRWSPLRG
CEDPETASIR AAGFAASTGL SRGGGVESGS FWEGKARTAL QALLHAGALG GRDARELYTW
SVNAPAAADA VAILHSHPDA APGWAESLEA TIHADPRTRE SVWIGVGQAL ACLANPATLD
AVTPRTGEHF SPAEFLRSNG TLYLLATGAG SKTVWPLIAA FVEDLVQTAS RLAAASPGSR
LDPPLLLSLD EIGNLAPLPS LPHLMSEGGG TGITTMPVLQ SLELARENWG RSAAGAIWDA
AITKVILGGS SSADDLRALS ALIGERDEVA TSTTIGPDGT RSTQRSSRRV PVLPPEHIRT
LPFGVGLTLL RSTSALVTDL RPWTVRDDVD RLMQERAATE TLLRQPS
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