Gene Xcel_0196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXcel_0196 
Symbol 
ID8647695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylanimonas cellulosilytica DSM 15894 
KingdomBacteria 
Replicon accessionNC_013530 
Strand
Start bp234402 
End bp235373 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content74% 
IMG OID 
ProductBile acid:sodium symporter 
Protein accessionYP_003324793 
Protein GI269955004 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.635742 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGACGC CGCGCACGCG GAACGTCGTC GAGTGGTGGG ACCGCCGGCA GGTCCCGCTC 
TACCTCGTCG CGATCGGGGT CGGAGCGGTG CTCGGCCTCG GCGCCCCGCA GGCCGCCCCG
GTGCTCACGC CGTCGATCAC CCCGGTCCTG GCGCTGCTGC TCTTCGCGAC GTTCCTCGGC
GTGCCGCTGG TCGAGGTCGG CCGGGCCGTC CGTGACCTCC GCTTCCTCGG GACGGTCCTC
GTCGCCAACT TCGTCGTCGT ACCGGTGATC GTCTTCGGGC TGTCCCGCCT CGTGGCCGAC
GACCGCGGAC TGCTGATCGG CGTCCTGCTC GTGCTGCTGA CCCCGTGCGT CGACTACGTC
ATCGTCTTCA CGGGGCTCGC CGGCGGGGCG CGCGCACGCC TGCTCGCCGC CGCACCGCTG
CTCATGCTCG TCCAGGTGCT CCTGCTGCCC GGCTACCTCC TGCTGTTCGC AGGTCGAGCG
GCGCTGTCCG TGGTCGAGAT CAGGCCGTTC GTCGAGGCGT TCGTCGTCCT GATCGTCCTG
CCGCTCGTCG CGTCGGCCGC CGTCCAGGCG CTGGGTCGCC GCAGGCGGGC CGGGCGGGTC
GTCGAGCACG TCATGGCCGC CGCGATGGTG CCGCTCATGA TGGCCACCCT CGCGGTCGTC
GTCGGCTCGC AGCTCGCCGC CGTCGGAGGC CAGGTCGCCG CGCTCGCGCG CGTCGTCCCC
GTGTATGTCG CGTTCGCCGT GGTCGCCGTC GTCGTCGGGC GGATCGCCGG GCGCGTCGCG
CGCCTCGACG TCCCCGCCAC CCGCGCCGTC GTCTTCTCCA CGACGACGCG CAACTCGCTG
GTCGTCCTCC CGCTCGCCCT CGCCCTCCCC GCGCCGCTCG CGATCGCCCC GCTGGCCGTC
GTGACGCAGA CCCTCGTCGA GCTCGTCGCC ATGGTCGTCC TCGTGCGGCT CGTCCCGCGC
CTGGTGCGGT AA
 
Protein sequence
MRTPRTRNVV EWWDRRQVPL YLVAIGVGAV LGLGAPQAAP VLTPSITPVL ALLLFATFLG 
VPLVEVGRAV RDLRFLGTVL VANFVVVPVI VFGLSRLVAD DRGLLIGVLL VLLTPCVDYV
IVFTGLAGGA RARLLAAAPL LMLVQVLLLP GYLLLFAGRA ALSVVEIRPF VEAFVVLIVL
PLVASAAVQA LGRRRRAGRV VEHVMAAAMV PLMMATLAVV VGSQLAAVGG QVAALARVVP
VYVAFAVVAV VVGRIAGRVA RLDVPATRAV VFSTTTRNSL VVLPLALALP APLAIAPLAV
VTQTLVELVA MVVLVRLVPR LVR