| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_0118 |
|---|
| Symbol | |
|---|
| ID | 8647613 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | - |
|---|
| Start bp | 131088 |
|---|
| End bp | 132389 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003324717 |
|---|
| Protein GI | 269954928 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.254663 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACTC CCGCGTCCGA CCCGTCCGGC CCGTCCGCCG CCGGCATCGT CGACCCCCGC
CGCGCGACGA TCATCCTCGT CGCGATGGCC GTCTCGACGT TCCTGTTCGT GCTCGTCGAA
GGGCTGCCCG GCGGCCTGCT GACGCTCATG GCCCCCGACC TGAACACGAC GACGTCACGC
ATCGGCCTGC TGGTCACCGG GTACGCGCTG GTGGTGCTCG TGACTACCGT GCCCCTCGCC
CGCATCACCC AGCACATCCC GCGGCGCTGG GTGCTGTCCG CGACCGTGCT CGTGGCCGCC
GCGGCCACCC TGTGGGCGGG CCTGGCCGGC AGCTACGGGT CGATCATGAC CGCCCGCCTG
GTCACCGCGC TGGCCCAGGC CCTGTTCTGG GTGGCCGTCA TCCCCGGCAC CACCGGGCTC
TTCCCACCGC GGGTGCGCGG CCGGGTGGTG GCCCGCCTGG CGCTCGGCAA CTCCATCGCC
CCCGTCCTCG GCCTGCCCGT CGGCACCTGG CTGGCCGAGC AGACGCACTG GCGGGTCACG
TTCTGGGTCG TCTCCGCGCT CTCGACGGTG ATCTTCGTCG TCGTCGTCAT GCTGTTCCCC
ACCGTGAGAC CGTCGGAGGG CGGCGCCTCA CGCGCCCCGT TCCCCAGCCG CCCCCGGCTC
CTGTACCAGC TCGTCACGAC GGCGCTCATC GTCACGAGCG CGTTCGGGCT GATCACCTTC
GTCACCCAGT TCCTGCAGGA CGTCGCCGGG TACGAGCGCG CGGACATGCC CTGGCTGCTC
GTCATCTCGG GCGCGGCCGG GGTCGTCGGG GCGTTCACCG TCGGGAGGTT CCTCGACCGG
CACTCGTGGG GGTCGCTCAC CGTGGGGATC GCCGTCGTCG CCGTCGCCCA GGTGCTCCTG
TTCGCGACGG GTGCGCACCC CGTGGCCGCG ATCGCCGGCA TCGCCCTGTT CGGGTGCGCG
TTCTCCACCG TGCCGCCCGC GCTCTCGCAC CGCGTGATGC TCGTGGCGCC CGGGTCCACC
GACATGGGCG TGGCGGTCTC GTCCGCGACG TTCAACCTGG GCATCGCGGC CGGGTCGGCG
CTCGGTGCCG CCCTCACCGC GGCCGTCGGA GTGCGGTGGG TGCCGTTCGT GGGAGCCGTG
CTCGCCGTGC TCGCCCTCGG GGCGAACCTG CTGGAGAACC GCTTCAACCC GCCCTTCCCG
GCCCACCGGC AGGCGGTCGA CGAGGCCCTC GGGCTCGACG CTCCCGAACC CGACGCCGCG
GCGCTCGACA CCACCGCGCG CGACGCGGCG CTGGAGGGTT GA
|
|---|
| Protein sequence | MSTPASDPSG PSAAGIVDPR RATIILVAMA VSTFLFVLVE GLPGGLLTLM APDLNTTTSR
IGLLVTGYAL VVLVTTVPLA RITQHIPRRW VLSATVLVAA AATLWAGLAG SYGSIMTARL
VTALAQALFW VAVIPGTTGL FPPRVRGRVV ARLALGNSIA PVLGLPVGTW LAEQTHWRVT
FWVVSALSTV IFVVVVMLFP TVRPSEGGAS RAPFPSRPRL LYQLVTTALI VTSAFGLITF
VTQFLQDVAG YERADMPWLL VISGAAGVVG AFTVGRFLDR HSWGSLTVGI AVVAVAQVLL
FATGAHPVAA IAGIALFGCA FSTVPPALSH RVMLVAPGST DMGVAVSSAT FNLGIAAGSA
LGAALTAAVG VRWVPFVGAV LAVLALGANL LENRFNPPFP AHRQAVDEAL GLDAPEPDAA
ALDTTARDAA LEG
|
|---|
| |