Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Taci_1286 |
Symbol | |
ID | 8631135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermanaerovibrio acidaminovorans DSM 6589 |
Kingdom | Bacteria |
Replicon accession | NC_013522 |
Strand | - |
Start bp | 1341550 |
End bp | 1342656 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | lipid-A-disaccharide synthase |
Protein accession | YP_003317799 |
Protein GI | 269792895 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.110727 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGTCCGTCT TCGTGAGTTG TGGGGAGGCC TCGGGGGACC GCTACCTGGG GGATCTGGCG TTCCGCCTCT CCCGGCGGGG CTTCCGCCTG TGGGGCATGG GGGGTCCCAG GTGCAGGGAG GCGGGGGTGG AGACCCGGTG GGACATGGGG GAGCTCCAGG TGATGGGGTT CACCGAGGCC CTTGGGGCCC TGGGGAGGCT CATCCGCCTC CGGGACCGGA TCGCCCTTGA GGTGGCCCGG GCCAACCCCT CCTGCGTGGT GCTGACCGAC AGCCCGGACT TCCACCTGCC CCTGGCCCGG CGGATCCGGC GGGAGGGTTA CCGGGGGCCC ATGGTTAGCC TGGTGCCCCC GGCGGTGTGG GCCTGGCGCT CCGGCAGGGT CAGGCACCTC AGGGAGCTCT TCGACCTGTG CCTTCCCCTG TTCCCCTTCG AGCACCGGTT CCTGCAGGAT CACCGCTGCC GGTCCGCCTT CGTGGGTCAT CCGCTCCTGG ACCGGATATC CCAGGCGGAG CTGGATCCCT CCTGCCGTAC GGTGGCCTTC ATGCCCGGAA GCCGTGGGGG GGAGGTGAGG CGTCACCTTC CGCCCTTCGC CCGGGCGGCG GAGCTCCTCA AGGGGGAGGG GTATCGGCCG GTCTTCTCCG TGGCGTCCTC CCTAGGGGAG GACGTGGCCC GGTGGATGGG GGACCTGTTG GGCCCATTGG GGGTGGAGGT GAGCCGGGAG GACGGGGTTT CCCTCCTGGC CCGCTCGGTT GGGGCGGTGA TGGCCAGCGG CACCGTGTCG CTGGAGGCCA TGTTGGTGGG CCGTCCAGGT GTGGTGGCCT ACAGGACGTC GTGGTTGTCC ATGGCCCTGG CCCGGCTCCT GGTGAGGTCC CCCCATTGTG CCCTGCCCAA CATCCTCCTG GGCAGGGAGC TCTACCCGGA GCTACTGCAG GGGGCGGTGA GAGGGGACCT GTTGGGCCGC AGGATCCTGG GGGTGTTGCG GCAGGTGGAG GACCCGGAGG GGCTCCGCGG GTGGCTTTCC GCCTTTCGGG AGGGGCGGAC CCTGCTTGGG AGGGCCGGGG CCTTGGACCT CTGGGAGGAG GTAGTTTCGG AGATGGCGTC CCGATGA
|
Protein sequence | MSVFVSCGEA SGDRYLGDLA FRLSRRGFRL WGMGGPRCRE AGVETRWDMG ELQVMGFTEA LGALGRLIRL RDRIALEVAR ANPSCVVLTD SPDFHLPLAR RIRREGYRGP MVSLVPPAVW AWRSGRVRHL RELFDLCLPL FPFEHRFLQD HRCRSAFVGH PLLDRISQAE LDPSCRTVAF MPGSRGGEVR RHLPPFARAA ELLKGEGYRP VFSVASSLGE DVARWMGDLL GPLGVEVSRE DGVSLLARSV GAVMASGTVS LEAMLVGRPG VVAYRTSWLS MALARLLVRS PHCALPNILL GRELYPELLQ GAVRGDLLGR RILGVLRQVE DPEGLRGWLS AFREGRTLLG RAGALDLWEE VVSEMASR
|
| |