| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_37760 |
|---|
| Symbol | |
|---|
| ID | 8635409 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 4220257 |
|---|
| End bp | 4221597 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | putative efflux protein, MATE family |
|---|
| Protein accession | YP_003316493 |
|---|
| Protein GI | 269797038 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGGACA GCACCACCCC CGAGCCACGC CGGCTGCTCG ACCGCCAGAT CCTCGCCCTC
GCCGTCCCCG CCCTCGGGGC GCTCGTCGCC GAGCCGGTCT TCGTGCTCGT CGACTCCGCC
GTCGTCGGCC ACCTGGGCAC CGAGCACCTG GCGGGCCTCT CCGTCGCCTC GACGATCCTG
CTCACGCTCG TCGGGCTGTG CGTGTTCCTC GCCTACGCGA CCACGGCGTC CGTCGCCCGA
CGGGTGGGTG CAGGCCGCCG GGCCGAGGCC CTCCAGTCGG GGGTCGACGG CATGTGGCTC
GCCGCCGGTC TCGGGCTCGT GCTGGCGACC GCGCTGTGGC TGCTGGCGCC CTGGGCCATC
GGGGCCATGG GTGCGCGGGG CGCCGTCGCC GAGCACGCCG TCACGTACCT GAGGTGGTCG
ACGCCGGGGC TGCCGGGCAT GCTCGTGGTG CTCGCCTCGA CGGGCGTGCT GCGAGGGCTC
CAGGACACCC GGACGCCGCT CTACGTCGCC GTCGGCGGCG CGATCACCAA CACCGTCCTC
AACGTCGTCC TCGTCTACGG CATGGGTCTC GGCATCGCCG GCTCGGCCGG CGGCACGGCA
GCCACCCAGC TGACGATGGG CGCCGTGCTC ACGGTGGTCG TCGTCCGCGG GGCCCGCGCG
GCAGGCGCGA CGCTGCGCCC GGCCTCGGGC GGGATCCTCG CCAACGCCCG CTCGGGTCTC
CCCCTGTTCG TGCGCACGCT CTCGCTGCGG CTCGCGATCC TGCTCACGGT CTTCGTCGCC
ACCAGCCTGG GCGCCGTCAA CCTCGCGGGC TACCAGGTGC TCAACAGCGT GTGGGGGCTG
GCGGCCTTCG CCCTCGACGC GCTCGCCATC GCGGCGCAGG CGCTGATCGG CCACCGGCTC
GGAGCCGGGG ACGTCACCCA GACGCGGGCG ATCCTGCGAC GCACCCTCCA GTGGGGTGTC
GGCGCCGGGG CCGCGATCGG CGTGGTGATC GCGGCCGGCG GGTGGTGGTT CGCCCTGCTG
TTCACGAGCG ACCACGAGGT GCGCGTCGCG ATCACCCTGG GCATGCTCGT CGCCGGGGTC
CTCATGCCGC TCGCCGGGTG GGTGTTCGTG CTCGACGGCG TGCTCATCGG CGCCGGCGAC
GGCCGGTACC TGGCCTGGGC CGGGATGGTC ACGCTGGTCG TCTACGCGCC CGTCGCGCTG
GCCGTCCGGG CGTGGGCTCC CGACGGCCCC GCCGGGCTGG CCTGGCTGTG GGTCGCCTTC
GCCGGGGTGT TCATGCTCAG CCGCGCGCTC ACCACCGGCC TGCGCGCCCG CTCCGACCGC
TGGATGGTCG CCGGCGCCTG A
|
|---|
| Protein sequence | MADSTTPEPR RLLDRQILAL AVPALGALVA EPVFVLVDSA VVGHLGTEHL AGLSVASTIL
LTLVGLCVFL AYATTASVAR RVGAGRRAEA LQSGVDGMWL AAGLGLVLAT ALWLLAPWAI
GAMGARGAVA EHAVTYLRWS TPGLPGMLVV LASTGVLRGL QDTRTPLYVA VGGAITNTVL
NVVLVYGMGL GIAGSAGGTA ATQLTMGAVL TVVVVRGARA AGATLRPASG GILANARSGL
PLFVRTLSLR LAILLTVFVA TSLGAVNLAG YQVLNSVWGL AAFALDALAI AAQALIGHRL
GAGDVTQTRA ILRRTLQWGV GAGAAIGVVI AAGGWWFALL FTSDHEVRVA ITLGMLVAGV
LMPLAGWVFV LDGVLIGAGD GRYLAWAGMV TLVVYAPVAL AVRAWAPDGP AGLAWLWVAF
AGVFMLSRAL TTGLRARSDR WMVAGA
|
|---|
| |