| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_37710 |
|---|
| Symbol | |
|---|
| ID | 8635404 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 4213253 |
|---|
| End bp | 4213891 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | peptidase E |
|---|
| Protein accession | YP_003316488 |
|---|
| Protein GI | 269797033 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.296778 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCAG CCCTCCTGCT CTCCGCCGGC CTCGGTGCCG TCCCCGGGTT CGTCCACGAG
CGTCGCCGTC CTGGTCCGGG CGCGCCCCGG GTGGGCTTCG TCGCCGCGGC GACGAGCATC
TACCCCTCGG CACCGTGGGT CGACGCCGAC CGGGAGGCCC TCACGTCCTT CGGCCTCGAC
CTCGTCGAGG TCGACCTCAC CGTCCTCTCG GGCGACGGGC TCACCGCGGC CGTCGCGGGT
CTCGACGCGC TCTATCTCGC CGGCGGGAAC ACCTTCGCGC TGCTCCACCA CCTGCGCCGG
TCCGGCCTGG ACCGTCTCCT GCCCGGCCTG CTCGACGACG GGCTGCTGTA CCTCGGCGCG
AGCGCGGGTG CCGCGGTCGC GGGTCTCGAC GTCGAGCCGC TCTCGCTCAT GGACGACCCC
GCCGAGGCCC CGCCCCTCGA GTCCACCCGT GGGCTGGGGC TCGTGGACCT CGTCCTCCTG
CCGCACGCCG ACGGCATGCT GCCCCCGTAC CCGTCGAGCC TCGTCGAGCG GATCGTCAGC
ACCTACGGTG ACAGGTTCCC GATCCAGCGG ATCGACGACG ACCAGGCGCT GCTGGTGGCC
GACGGTACGG CACAGGTGGT GCACTCTGCC ACGGTCTGA
|
|---|
| Protein sequence | MTSALLLSAG LGAVPGFVHE RRRPGPGAPR VGFVAAATSI YPSAPWVDAD REALTSFGLD
LVEVDLTVLS GDGLTAAVAG LDALYLAGGN TFALLHHLRR SGLDRLLPGL LDDGLLYLGA
SAGAAVAGLD VEPLSLMDDP AEAPPLESTR GLGLVDLVLL PHADGMLPPY PSSLVERIVS
TYGDRFPIQR IDDDQALLVA DGTAQVVHSA TV
|
|---|
| |