Gene Sked_36800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_36800 
Symbol 
ID8635313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp4113641 
End bp4115089 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003316400 
Protein GI269796945 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0161837 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.220338 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCCA CCCTCACCGC CTCCCGCAGC CGCAGGCACC GCGCCGTCGC GCTCGGTGCC 
GCACTGCCCC TCGTCCTGCT CGCCGCCTGC TCGTCCTCGG ACGACTCCGC CGACGCCGCC
ACCGGCACGC CCGAGCCCAC CGAGTCCGCC ACCTCCGCCC CCGCGGTCGA GGCCGCCGGC
CTCACCCCGC GCCTGGTCAT CACGTACGAC GGCGGCATCC AGGTCCTCGA CTCGACCACC
CTCGAGACGA TCGAGGACAT CGAGCTCGAC GGCTTCAACC GCATCAACCC CGCGGGCGAC
GGGCGCCACG TCCTCGTCTC GACCGCGGGC AAGTTCCAGG TCCTCGACGC CGGCACCTGG
GCCGAGCCGC ACGGCGACCA CGCGCACTAC TACACGACCA CGCCGCAGCT CACGGACATC
TCCTTCGAGG CCGACAAGCC GGGCCACGCC GTCGTCCACG AGGGCCGTAC CGCGCTCTTC
GCCGACGGGA CCGGTGACAT CACCGTCTTC GACTCCGCCG AGGTCGCCGA CCCCGACCGC
GAGGTGCGCG AGGTGAGCAC CCCGAGCGCC CACCACGGCG TAGCCGTCGA GCTCTCCGAC
GGGACGCTCA TCGTCTCCGA GGGCACCGAG GACGCCCGCA CCGGCATCCG CGTGCTCGAC
GCCGAGGGCA CCGAGGTCGC CGCGAACGAC CAGTGCCCCG GCGTGCACGG CGAGGCCGTC
GCGGCCGACG AGGCGGTGGT CATCGGCTGC CAGGACGGTG CGCTCGTCAC GAAGGACGGC
GTCATCAGCA AGGTCACCGC ACCGGACGCC TACGGACGCA TCGGCAACCA GGCCGGCAGC
GAGGACTCCC CCTACGTCCT CGGCGACTAC AAGACCGACC CCGACGCCGA CCTCGAGCGC
CCCACGCGCG TGTCGATCAT CGACACCCGC GACGCCTCGA TGAAGCTCGT CGACCTGCCC
GCCTCGTACA CCTTCCGCTC CCTCGGGCGC GGCGACGCCG GCGAGGCCCT CGTGCTCGGC
ACCGACGGCG CCCTGCACGT CATCGACCCC GAGACCGGGA CCGTCACGCG CTCCGTCCCC
GTGATCGACG AGTGGGAAGA GTCCGAGACC TGGCAGGACC CGCGCCCGAC CCTGTACGTC
CAGGACGGCA GCGCCTACAT CACCGACCCG TCCACCTCGA TGATCCACGC GGTCGACATC
GAGACCGGCG AGATCTGGAA CAGCGTCGAG CTCACCGTCG TCCCGAACGA GCTCACCGGC
GCCTCGGGCG ACGTCGAGCA CGGCGCCGAG GTCGAGCACG AGGGTGCCGA CCACGGTGAC
GCGGCGACCG ACGAGCACGA GGGCCACGAC CACTCGGACG AGGCCACGGA CGCCACCACC
GACGAGCACG ACCACGAGGG TCACGACCAC GAGCACTCGG ACGAGGCCAC CGAGACCCCG
ACCAGCTGA
 
Protein sequence
MSPTLTASRS RRHRAVALGA ALPLVLLAAC SSSDDSADAA TGTPEPTESA TSAPAVEAAG 
LTPRLVITYD GGIQVLDSTT LETIEDIELD GFNRINPAGD GRHVLVSTAG KFQVLDAGTW
AEPHGDHAHY YTTTPQLTDI SFEADKPGHA VVHEGRTALF ADGTGDITVF DSAEVADPDR
EVREVSTPSA HHGVAVELSD GTLIVSEGTE DARTGIRVLD AEGTEVAAND QCPGVHGEAV
AADEAVVIGC QDGALVTKDG VISKVTAPDA YGRIGNQAGS EDSPYVLGDY KTDPDADLER
PTRVSIIDTR DASMKLVDLP ASYTFRSLGR GDAGEALVLG TDGALHVIDP ETGTVTRSVP
VIDEWEESET WQDPRPTLYV QDGSAYITDP STSMIHAVDI ETGEIWNSVE LTVVPNELTG
ASGDVEHGAE VEHEGADHGD AATDEHEGHD HSDEATDATT DEHDHEGHDH EHSDEATETP
TS