| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_36550 |
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| Symbol | |
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| ID | 8635288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | + |
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| Start bp | 4081829 |
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| End bp | 4084369 |
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| Gene Length | 2541 bp |
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| Protein Length | 846 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | |
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| Product | ATP-dependent transcriptional regulator |
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| Protein accession | YP_003316375 |
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| Protein GI | 269796920 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0123072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGTG AGAAGCCGCG CTGGAGCGCA CCTCCACGGG TCCCGACGCA CCTCGTCCCC
AAGCCCGACG TCTACGACAC CCTCGAGACC GGCAGCGCCG TCACGGTGCT GCGCGCACCC
CAGGGCTACG GCAAGTCCGC GCACGTCAGC GAGTGGCTGC GCCGGACCGG GCACCCCGCC
GTCTGGATGA CGGCCCGCCC CACGGACGTC GCCGACGAGT TCTGGGCCTC GCTGCTCGAG
CTGCTCGTCC ACGCCGGGGT CGCCGACGCG TCCGCGGGCG CGAACGAGGC TGCCGAGCCG
GCAGCTGCCG TGCGTGACGC GCTCACCCGC TGGCCGACCC CCTTCGTGCT CGTCGTCGAC
CAGCTCGAGG CCGTCCGGGC CGCGCGCGTC GACACCGCGC TCGCGCAGAT GGTCCGTGCG
TCGCCCGCGG TGCGGCTCGT GCTGTGCAGC CACATCTCGA GCGACCCCGA GCACCTGGCC
CGCCTCGGCA TGGACACGGT CTTCGTGGAG GGGCAGGCCC TCGCGCTGAC GCACCCCGAG
GTCGCCCGCC TGGCCATCTC CCTCGACGCG GTGGTCGCCG ACGGCGTCGT CCGCGACCTC
TGCCACGACC TGTGGGGCTG GCCGGCGCCG ATCCGCGGTC TCCTCGCGAG CTCCGTCGGC
TCGGGCGAGG TCCCCCGCGC CGACTGGTCC ACCCTCGGGT CGCTGTTCGG CAACCGCTCC
ATCGAGGGGT CCACGGGCTC GCTGTTCGTG GTGCGCACCA CCGTGGTCGA GGAGCTCACC
GTCGAGCTCG CACGCTCGCT CTCGGGGACC GAGACGGCCG GGCACCTCCT GGCGACCCTC
GAGGCCGCCG GCCTGGCCCG CTCACGCCCG AGCCCCCAGG GGCGCGTCTA CACGTACATG
CCGCTGCTGC GCTCGCTGTC GACCACCTCG GAGTGGACCC AGGTCTCGGA GCTCGTGACC
GACGCGCACC GCACGGCGGC GCAGGTCCTC GCCGACACCC CCGAGCGCGC CCTCCACCAC
GCCGTCTCGG CGCGAGACTG GGAGCGGGTC GTGGAGATCG CCGACGCGTC CTGGGTGCAC
CTGGTCATGA CCGACCCGGC CGCCCTCGCC GACGCGCTGT CCCGGCTGCC CGGTCGATGG
TTCCAGCGGA TGCCGCGGCT CGTCACCGTC CGGGACGTCC TGCTGGAGGA CCGCAACGAC
ACGATCGTCG CGCTCAGCGT CCCGTGGCCC GACCCGGACG AGGTCGTCGA GGAGTCGGCG
CTGCGCGACG TCGTCGGTGT CGCCGTCGGC CAGATCGTGG CCGCCCGCCG TGCCCGCAGG
CCCGACCTCG CCGGCGACCT CGCGACCCGG ATGGTCGCGG CGCTGCGCGA CAGCGACGGC
CACTACCGCG CCGGCACCGA GGACCTCCTG CCGTTCCTGC TGCTGCACGC GGGCGTGGCC
CAGCTCGTGG CAGGCGACCT GCAGGCGGCG ACCGACGACC TCCTGGCCTG CCTGTGGGCG
GGGACGGGCA GCGACCTCGA GTTCGTGGCC CGCAACGCCG CCGAGACCGT CGCGCTGCTC
GACGCGGTGC GCGGGTCGAA CCAGAGGGCG CGGGAGCACC TCGCGACCGC CGCGACCCTC
ACCGCACCGC CGCGGAAGAT CGCGACCACC ATGGACCTGG TCGCGCCGGT CGCCGAGGCG
CTGCTCGCGA TCGACCGCCT CGACCTCCAC GCCGCCGAGC AGCACCTCGA GGACCTGCCG
GCCCCCGGGA TCGTCGAGTA CCAGCGGCAT GCCGCCTGGT ACGTGCTCGA CCTGGCCCGC
GCCATGGTCC GGTCGCTGCA GGGCGACCTG GACGGCGCGA TGGGCACCCT CGAGGACGCG
GTGGTCTCGG CCGGCTCACG GCTCACCGTG CCGTCGCTCG CCCACACCGT CCTCACGTCG
GCGCACGCCC GCCTGCTCGC GGTGGCGGGC AACCCGACGC GCGCGCAGAA CCTCCTGGCC
GCGCACCCCT CGCTCCACGA CGACGCCGTG CTGCGCGCCC GGCTGTCGCT CAGCGCGGGC
GACCCCGTGG CCGCCGTCGA GATCTGCACG ACCGCGCTGT GGCGTGACTC GTCAGGCCCG
CGCGAGCGCG TCTCGGTGCT GCTCGTCGAC ATGGAGGCCC GGGACGCCCT CGGCGACGCC
CCGGGCGCGG CGTCTGCGCT GCGCCGGGCC GTCCAGACCT CGCGGGCAGG GCTGCTGCAG
CCCTTCGCCC TCACCGACCG TGCCCTGCTC GAACGGGTCG CCGAGCAGGT CCCCGAGGCC
GCAGAGGTCC TCGCCCTGCT GCGGGCCGCG TCGCTGCCCG AGCACTCCGT GCAGGACGTG
CCGGTGGTCG AGCTGTCCGA GCGCGAGGTC GCGGTGCTCC GTGAGCTCGA GACCACGGCG
TCCGTCGAGG TCCTGGCCCG GCACCTGTTC GTCTCGGCGA ACACCGTGAA GTCCCAGCTG
CGGTCGCTCT ACCGCAAGCT GGGCGCGACC AGCCGCGGCG CCGCCCTCGC CGAGGGCGCG
CGGCTGGGGT ACCTCACCTA G
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| Protein sequence | MSREKPRWSA PPRVPTHLVP KPDVYDTLET GSAVTVLRAP QGYGKSAHVS EWLRRTGHPA
VWMTARPTDV ADEFWASLLE LLVHAGVADA SAGANEAAEP AAAVRDALTR WPTPFVLVVD
QLEAVRAARV DTALAQMVRA SPAVRLVLCS HISSDPEHLA RLGMDTVFVE GQALALTHPE
VARLAISLDA VVADGVVRDL CHDLWGWPAP IRGLLASSVG SGEVPRADWS TLGSLFGNRS
IEGSTGSLFV VRTTVVEELT VELARSLSGT ETAGHLLATL EAAGLARSRP SPQGRVYTYM
PLLRSLSTTS EWTQVSELVT DAHRTAAQVL ADTPERALHH AVSARDWERV VEIADASWVH
LVMTDPAALA DALSRLPGRW FQRMPRLVTV RDVLLEDRND TIVALSVPWP DPDEVVEESA
LRDVVGVAVG QIVAARRARR PDLAGDLATR MVAALRDSDG HYRAGTEDLL PFLLLHAGVA
QLVAGDLQAA TDDLLACLWA GTGSDLEFVA RNAAETVALL DAVRGSNQRA REHLATAATL
TAPPRKIATT MDLVAPVAEA LLAIDRLDLH AAEQHLEDLP APGIVEYQRH AAWYVLDLAR
AMVRSLQGDL DGAMGTLEDA VVSAGSRLTV PSLAHTVLTS AHARLLAVAG NPTRAQNLLA
AHPSLHDDAV LRARLSLSAG DPVAAVEICT TALWRDSSGP RERVSVLLVD MEARDALGDA
PGAASALRRA VQTSRAGLLQ PFALTDRALL ERVAEQVPEA AEVLALLRAA SLPEHSVQDV
PVVELSEREV AVLRELETTA SVEVLARHLF VSANTVKSQL RSLYRKLGAT SRGAALAEGA
RLGYLT
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