Gene Sked_36170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_36170 
Symbol 
ID8635250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp4048039 
End bp4048815 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content72% 
IMG OID 
ProductABC-type multidrug transport system, permease component 
Protein accessionYP_003316337 
Protein GI269796882 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA CCCAGCCCCG TCCGCTGTCG ACGGCGCACC TGACCCGGCT GCACCTCAAG 
TACCAGTTCC TCGAGACGGT CCGGGTGCCG ATGGCCGTCC TCGGGAACCT CCTGTTCCCG
GCGCTCGCGA TGTTCTTCTT CGTGGTGCCG CAGCCCGCCG TCGCGGACGA CCCTGTCGCC
TCGACCATGG CGGTGGCGTC GCTCGGCCTG TTCGCGATCT GCTCGGCGAG CCTGTTCGCG
CACGGCCTGG GGGTCGCGGA GGACCGGTCC CTGCCCTTCG ACCCGTTCCT GCGGTCCATG
CCCGCCGGCC CGACCCCGCG GATGATCGCC CGGGTCCTCA ACGGCGGCGT CTTCTCGTTG
TTCGGCCTCG TCCCGCTGAT CGTCATCGGG TGGCTCTTCA CGGCCGCCAC GGTGAGCTGG
TCCCAGCTGC TGCTCGGCGT GGGTGTGCTG CTCGTCGTGT CGGTGCCCTT CGTGCTGCTC
GGGATGGGCA TCGGGTACTC CCTGCCCGTC AAGGCCGCGG TGCCCGTCGT GCAGCTGGTC
CTGTTCCCGC TGGCCTTCGC CGGGGGTCTG TTCATGCCGC CGCAGTTCTT CCCCGACTGG
CTGGCGACCC TCTCGCAGGC GACCCCGACC CGCGCGGGCC GTGACCTGCT GGTCGGCGCG
CTCACCGGCG AGGACGTCTA CGCGGGCGCG TGGCCGGTGC TCCTCGGCTG GACCGTGGCC
TTCGCGGCGC TGACCGTCTG GGCCTACCGC CGCGACGAGG GCCGCCGCTT CCGTTGA
 
Protein sequence
MTATQPRPLS TAHLTRLHLK YQFLETVRVP MAVLGNLLFP ALAMFFFVVP QPAVADDPVA 
STMAVASLGL FAICSASLFA HGLGVAEDRS LPFDPFLRSM PAGPTPRMIA RVLNGGVFSL
FGLVPLIVIG WLFTAATVSW SQLLLGVGVL LVVSVPFVLL GMGIGYSLPV KAAVPVVQLV
LFPLAFAGGL FMPPQFFPDW LATLSQATPT RAGRDLLVGA LTGEDVYAGA WPVLLGWTVA
FAALTVWAYR RDEGRRFR