Gene Sked_36020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_36020 
Symbol 
ID8635235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp4029316 
End bp4030824 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content75% 
IMG OID 
Productglutamyl-tRNA reductase 
Protein accessionYP_003316322 
Protein GI269796867 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.799704 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.545642 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATGA CCGCAAGTCA CCACGAGCTT GACCTCGAAG CGCTCGAGCA GCTGTCAACA 
GGCGCGCATT CGATGGGCAC GTCGGCCGTG CGGACCTGCG AGATGATCAC CGGTGCGGTC
GTGCTCGCGA CCTGCAACCG GTTCGAGCTG TACCTCGACC TCGCCGACGG TGCGGCCCGC
TCCGCCGTGC CCGGGACCCT CACCGAGCGT GACCTTGCCC ACGCCGCCGA CGAGGTCGCC
CGCCTCATCG CCGTCGAGTC CGGTGTCTCC CAGGAGGCCG CGCGGTCCGC GTTCACGGTC
CGCAGCGGCG CCGACGTCAC CCGGCACCTC TTCACCGTCG CCTCGGGTCT CGACTCGATG
GTCGTGGGCG AGCGGGAGAT CGCCGGGCAG GTGCGCCGCG CCCTCGACTC CTCGCACGCC
GAGGCGACCA CCAGCCCCCG GCTGGAGCGG CTCTTCCAGT CGGCGTCCCG CGCCTCCAAG
CGCGTCGCGC ACACCACGCA CCTCGGGGCC GACGGCCGCT CCGTCGTGTC GGTCGGGCTC
GACCTCGCCG AGGCCAGCAT CCCGCCGTGG CGCCAGACAT CTGCGGTGAT CGTCGGGACC
GGTGCCTACG CCGGCGCGAC CGTCGCGGCG CTCCGCGCCC GCGGGTGCGC GGACATCGCC
GTGTACTCCG CCTCTGGTCG TGCCGAGCAG TTCGCGCGGG ACCGCGGCGT CGACGCCGTG
ACCGACCTGG TCGCCGCCCT CGGCGAGGCC GACCTCGTGG TCTCGTGCAG CGGGGCGGGT
CGCCGGAACC GGACCGGGAG CACGGGGCTG CCCTCGGACG ACCCGACCGC GCTGCGCTAC
ATCCTCGAGA CCGCGGCCGT CGTCGCGGCG CGCGAGGACG CCGGCGTGCG CGCCGGCGAC
GCCGTACCTG CCCGGCCGCT GGTGGTGCTC GACCTCGCGC TGCACCACGA CGTCGACCCG
GGCGTCGGCG ACATCGACCA GGTGCTGCTC ATGGACCTCG GGACCATCCG CAGCCACGCG
CCGTCGACGT CGTCCCTGCC GGTGCGGGCA GCACGCGAGA TCGTCGCGGC GGCCGTCGTC
GACTTCTCCG ACGGCGAGAC GATGCGGTCC GCCGACGCCG TGGTCGTCGG GCTCCGGGAC
AGGATCGCCC TCGAGGTCGA GGCCGAGCTG GCCCGGTCCG CGTCGTCGTT CTCCACCCCC
GCCGACCTCG CCGCCCACGA GAAGTCGCTG CGACGCTTCG CCGCGACCAT GCTGCACCGC
GGGATCACCC GGATCCGCGA GGCGGCGCGC GCCGGAGAGC CTCTCGACGA GGTCGCCGAG
GACACCGCGA CCGTGCTCTC GATGCGCTGG AAGGGCCGCC GCGCGGTGCC CGGGGCCGCG
CCCACGGGCG GCGCGCTGCC CGACCGCGCT GTGCTGTCGG ACCGCGCTGT GTTGTCGGAC
CGCGCTGTGC TGCCCGACCG CGCGGCCGAG CGCCGGACTG CGCAGCAGGG CGACCTGGCC
GCGGGCTGA
 
Protein sequence
MSMTASHHEL DLEALEQLST GAHSMGTSAV RTCEMITGAV VLATCNRFEL YLDLADGAAR 
SAVPGTLTER DLAHAADEVA RLIAVESGVS QEAARSAFTV RSGADVTRHL FTVASGLDSM
VVGEREIAGQ VRRALDSSHA EATTSPRLER LFQSASRASK RVAHTTHLGA DGRSVVSVGL
DLAEASIPPW RQTSAVIVGT GAYAGATVAA LRARGCADIA VYSASGRAEQ FARDRGVDAV
TDLVAALGEA DLVVSCSGAG RRNRTGSTGL PSDDPTALRY ILETAAVVAA REDAGVRAGD
AVPARPLVVL DLALHHDVDP GVGDIDQVLL MDLGTIRSHA PSTSSLPVRA AREIVAAAVV
DFSDGETMRS ADAVVVGLRD RIALEVEAEL ARSASSFSTP ADLAAHEKSL RRFAATMLHR
GITRIREAAR AGEPLDEVAE DTATVLSMRW KGRRAVPGAA PTGGALPDRA VLSDRAVLSD
RAVLPDRAAE RRTAQQGDLA AG