Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_35610 |
Symbol | |
ID | 8635194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 3979518 |
End bp | 3981422 |
Gene Length | 1905 bp |
Protein Length | 634 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | thiol-disulfide isomerase-like thioredoxin |
Protein accession | YP_003316282 |
Protein GI | 269796827 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTGCGA ACACCCAGCC CTCAGCCCGC CTGCCCCGCG TCCGCGCCTC CGAGCTCGTC GGGCGCGGCT GGCTCAACAC GGGCGGCGTC GACGTCACCC TCGCCGACCT GCGCGGGAAG ATCGTGGTCC TCGACTTCTG GACCTTCTGC TGCGTCAACT GCCTGCACGT CCTCGACGAG CTGCGCGAGC TCGAGGAGGC GCACCGCGAC GAGGTCGTCA TCGTCGGTGT GCACTCGCCC AAGTTCGTCC ACGAGGCCGA CCCGGTCGCG CTCGCGGCCG CCGTCGACCG CTACGAGGTG CGCCACCCCG TCCTCGACGA CCCTGACCTC GTCACCTGGT CCGCGTACAC GGCCCGCGCC TGGCCGACCC TCGTGGTCGT CGACCCCGAG GGCTACGTCG TCGCGCACAT GGCGGGCGAG GGGCACGCGT CCACCCTCGA GATCCTCGTG CGCGAGCTCG TCGAGGAGCA CTCCGCGAAG GGCACGCTGC ACCGCGGCTC GGGTCCCTAC GTGCCCGCCG AGCCCACCCC CGGGACCCTG CGCTTCCCCG CGGCCGTGAT CGCGCTCGAG TCCGGGAACC TGCTGGTCGC CGACGCGGGG CACCACAGCC TCGCCGAGCT CGCCGCGGAC GGCGAGACGC TCGTCCGGCG CATCGGCTCC GGCGAGCGCG GGCTGTCCGA CGGCGGGCGG CAGGATGCGA CCTTCAGCGA GCCGAACGGC CTCTGCCTGG TGCCCGCCAC GCTCCGCGAC CAGCTCGGCT ACGACGTCCT CGTGGCCGAC ACTGTGAACC ACGCGCTGCG CGGCGTGCGG CTCTCGGACG GGCACGTGAC CACGGTCGCC GGGACCGGCG ACCAGCTCAT GGTCGGCGGG GCCGAGAACG TGGTCCCCGA GACCACAGCC CCCGACGCGA CCCCCGCCCT GCGGCACCGG CTCACCTCGC CGTGGGACGT CGTGTGGTCC GAGCGCCTCG GTGCGTTCCT CGTCGCCATG GCCGGCAACC ACTCGCTGTG GACCTTCGAC CCGGTCGCCG GGGTCGTCGA GCAGGTCGGC GGCACGCAGA ACGAGGGCCT GCTCGACGGG CCGCTCGCGC AGGCGTGGTT CGCGCAGCCC TCCGGGCTGT CCGTCGGCCC CGACGGCTCC GTGTGGCTCG CGGACGCGGA GACCTCCGCG CTGCGCCGCG TCGACGTCGC CGACGACGGC TCCGCGACCA TCACCTCGCT CGTCGGGCAG GGGCTCTTCG ACTTCGGTCA CCGTGACGGT GCAGCCGCCC AGGCGCTGCT GCAGCACCCG CTCGGCGTCG CCGCGCTGCC CGACGGCTCC GTCGTCGTCA CCGACACCTA CAACGGCGCG CTGCGCCGCT ACGACCCGGC CACCGACGAG GTGACCACGC TGGTCGGCGG CCTCGCCGAG CCGAGCGACG CGCTCGTCCA GGTCGACGGC GATGAGGTCC ACGTGCTCGT CGTCGAGTCG ACCGCCCACC GCATCACCCG CGTCGCCCTC CCGGCGACGC TCGCCGGCGA GGTCCTCGAC TCCGGTGCGC ACCGCACGCA GCGCCCCGTC ACCGACGTGC CGCCCGGCGA GCTGCGCCTC GACGTGGTCT TCACCCCCGC CACGGGGCAG AAGTACGACG ACCGCTTCGG CCCGTCGACC CAGCTCACCG TCTCGTCGAC CCCGCCCGAG CTGCTGCTCG AGGGCGCCGG GCGCGACCTC CCGCTGGTGC GCACGCTGCG CATCAACCCC GAGGTCGCCG AGGGCGTCCT GCACGTGACC GCGCAGGCCG CCAGCTGCGA CGCGGACCCG GCCGTCGAGT TCCCCGCCTG CCACCTCGCC CAGCAGGACT GGGGTGTGCC CGTCCGGGTG GTCGCCGGCC AGCCGGACGT GCTCACGCTG CCGCTGCGCG GCTGA
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Protein sequence | MTANTQPSAR LPRVRASELV GRGWLNTGGV DVTLADLRGK IVVLDFWTFC CVNCLHVLDE LRELEEAHRD EVVIVGVHSP KFVHEADPVA LAAAVDRYEV RHPVLDDPDL VTWSAYTARA WPTLVVVDPE GYVVAHMAGE GHASTLEILV RELVEEHSAK GTLHRGSGPY VPAEPTPGTL RFPAAVIALE SGNLLVADAG HHSLAELAAD GETLVRRIGS GERGLSDGGR QDATFSEPNG LCLVPATLRD QLGYDVLVAD TVNHALRGVR LSDGHVTTVA GTGDQLMVGG AENVVPETTA PDATPALRHR LTSPWDVVWS ERLGAFLVAM AGNHSLWTFD PVAGVVEQVG GTQNEGLLDG PLAQAWFAQP SGLSVGPDGS VWLADAETSA LRRVDVADDG SATITSLVGQ GLFDFGHRDG AAAQALLQHP LGVAALPDGS VVVTDTYNGA LRRYDPATDE VTTLVGGLAE PSDALVQVDG DEVHVLVVES TAHRITRVAL PATLAGEVLD SGAHRTQRPV TDVPPGELRL DVVFTPATGQ KYDDRFGPST QLTVSSTPPE LLLEGAGRDL PLVRTLRINP EVAEGVLHVT AQAASCDADP AVEFPACHLA QQDWGVPVRV VAGQPDVLTL PLRG
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