Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_35350 |
Symbol | |
ID | 8635168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 3948815 |
End bp | 3949486 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003316257 |
Protein GI | 269796802 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.147408 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGTGGG CAGCCTTCGT CCACGAACGG GGTCAGACCG TGTCAGAATC CGCGCAGCCG CCTCGCGAGC GGGGCTACGC CAAGGGGCGG GCGACCCGCG TCCAGATCGT CGAGGCCGCG ATGGTCTTGT TCGGCGAGGT CGGGTACCGC TCGGCGTCGC TGCGCGAGAT CGCCTCGCGC GTCGGCATCT CCCACCCGGG CCTCATCCAC CACTTCCCGA CCAAGGAGGT GCTGCTCGCC GCCGTGCTCG AGCACCGCGA CGAGATGGAC GACTCCGAGC TGTCGGCCGA CCTGGCCTCG GGCACCGGGC TCATGGACGC CGTCGTGCGC CTGGTCCGGC GCAACTCCGA GCGCCCCGGG ATCGTCGAGC TCTTCACCAC GCTGGCCGCC GAGGCCACGG CCCCCGACCA CCCCGCGCAC CAGTACTTCC GCGAGCGGTA CGCGACCACG CTCGCGCTGC TGACCCGCGA GCTCGAGACG CTCCGCGCCG ACGGTGCGCT GCGCCCCTCC GTCGAGCCGG CGGCCGCGGC CCGCGCGCTC ACCGCCCTCA TGGACGGGCT GCAGGTCCAG TGGCTGCTCG AGCGCGGTGC CGACGACCAG GTCGACATGG CGGCCGTGAT GCGCGACGCC CTCGACCTGT ACGTGGTCGG CGCGGCAGAG CGGCGAGACT GA
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Protein sequence | MPWAAFVHER GQTVSESAQP PRERGYAKGR ATRVQIVEAA MVLFGEVGYR SASLREIASR VGISHPGLIH HFPTKEVLLA AVLEHRDEMD DSELSADLAS GTGLMDAVVR LVRRNSERPG IVELFTTLAA EATAPDHPAH QYFRERYATT LALLTRELET LRADGALRPS VEPAAAARAL TALMDGLQVQ WLLERGADDQ VDMAAVMRDA LDLYVVGAAE RRD
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