| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_35250 |
|---|
| Symbol | |
|---|
| ID | 8635158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 3935877 |
|---|
| End bp | 3936590 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | rRNA methylase |
|---|
| Protein accession | YP_003316247 |
|---|
| Protein GI | 269796792 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.925094 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGACAC CGCAGCCCCG AGCCGTGGCC GACCGGTCCG AGCAGCCCGA CGCCCCGGCA
GACGAGCGCG CCGGGCGGCC CGACCACGAG GTCGGCGTCG GACCGTGGCC CGGGGGCCAC
GACGCCTGGC CCCGCACGGA CGACGGCGCC CTCGACCCGC GGTACGACCC CGACCTCCTC
GAGCACGGCG ACCGCCGGAA CGTCGTCGAC GAGTTCCGCT ACCTCACGGT CGAGGCCGTC
GTCGCCGAGC TCGACACCCG TCGGCACCCG CTGCACGTGG CGATCGAGAA CTGGGGCCAC
GACCTCAACA TCGGGTCGGT CGTGCGCACC GCGAACGCCT TCGCGGCCGC AGAGATCCAC
ATCGTGGGTC GCAGGCGCTG GAACCGCCGT GGCGCGATGG TCACCGACCG GTACCAGCAC
GTGCGCCACC ACCCCGACGT CGAGGCCTTC CTCGCGTGGG CGCAGGACGC GGGCCTGCCC
GTCGTCGGGA TCGACAACGT GCCCGGGTCC GTCGCGATCG AGCGGTACGC CTTCCCGGAG
CGCTGCGTCA TGCTCTTCGG CCAGGAAGGA GCAGGTCTGA CCCCCGAGGC CCGCTCGGCC
AGCGTCGACC TGGTGCACAT CACGCAGTTC GGGTCGACGC GGTCCATCAA CGCGGGCGCG
GCGGCCGCCG TCGCGATGCA CGCGTGGGTG GTCCAGCACG CCCAGGTCGG CTGA
|
|---|
| Protein sequence | MVTPQPRAVA DRSEQPDAPA DERAGRPDHE VGVGPWPGGH DAWPRTDDGA LDPRYDPDLL
EHGDRRNVVD EFRYLTVEAV VAELDTRRHP LHVAIENWGH DLNIGSVVRT ANAFAAAEIH
IVGRRRWNRR GAMVTDRYQH VRHHPDVEAF LAWAQDAGLP VVGIDNVPGS VAIERYAFPE
RCVMLFGQEG AGLTPEARSA SVDLVHITQF GSTRSINAGA AAAVAMHAWV VQHAQVG
|
|---|
| |