Gene Sked_34780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_34780 
Symbol 
ID8635111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3886746 
End bp3887900 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content73% 
IMG OID 
ProductS-adenosylhomocysteine hydrolase 
Protein accessionYP_003316200 
Protein GI269796745 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0841132 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG CCGCCCGGAT CGCCTGGGTC GACCAGCAGT GCCGCCTCAT GGCCGGGATC 
CGCGAGGAGA TCGCCCAGAC CCGGCCCTTC GACGGGCTGA CCGTCGGGTC GGCGATCCAC
CTCGAGCCCA AGACGGCCGC CCTCGTCGCG ACGCTGCGCG CGGGCGGCGC GGAGGTCGTC
GCGACCGGGA ACCTCGGGTC GACCCAGCCC GGCACCGTCG AGCACCTGCG GGCCAGCGGC
GTCCGGGTGG TCGGCGAGCC GACGCGCGAC CGTGCGGTGC GCGCCCGGCA CATCGACGAG
GTCCTCGACG CCGAGCCGCA GCTGCTCCTC GACAACGGCG GGGACCTGTT CCTGCGCTAC
CTCGAGCGCC CGTACGCCGG GCTGCTCGGT GGCACCGAGG AGACCACCTC GGGGCGGCAG
GTCCTCGAAC CGCACCGTGC CGCGCTCGCG ATGCCCGTCC TCGTCATCAA CGACAGCCCC
ATCAAGGCCT TCGCCGAGAA CCAGCACGGC GTCGGGCAGA GCGTCCTCGA GTCGTACCTG
CGCTTCACCA ACCGGATCAC CCACGGCGAG CGGGTCGTCG TCGTCGGGTA CGGGTGGTGC
GGCCGCGGGG TGGCCGACAC CTTCCGCAAC GCCCGCAGCC AGGTGACGGT CGTCGACGCC
GACCCGGTCA TGTGCCTGCG GGCCCTCATG GACGGCTTCC GCACCACCTC GCTCGAGGCG
GCGCTCGTCG ACGCCGACGT CGTCATCACC GTGACGGGCG GCGGGCGCGT CCTCGGCCCC
GAGCACACCC ACCTGCTGCG CGACGGGGCG GTCCTCGCCA ACGCCGGGCA CGAGCCCGAC
GAGATCGACC TCGACGCCAT CGAGGCGCTG CCCGGCGTGA CCGCTGGCGA GACGCTGCCC
GACGTCCGGT CGGTGACCTT CACCGACGGT CGCACGGTCC ACGTCCTCGG CAGCGGGCAC
ATGGTGAACC TCGCCGGACC GGGCGCGCGC GGCAACTCGA TCCAGTCGAT GGACATCGGG
TTCTCCCTCC AGACCCTCTG CCTCGCCCAG GTCGCGACCG GACAGGTCGG CCCGCAGGAC
TGCGTGGTGC CGGTGCCGCG CGCGGTCGAC GTCGCGGTCG CGACTGGTTA TCTCGCACTC
AAGGGGATGG TGTGA
 
Protein sequence
MTDAARIAWV DQQCRLMAGI REEIAQTRPF DGLTVGSAIH LEPKTAALVA TLRAGGAEVV 
ATGNLGSTQP GTVEHLRASG VRVVGEPTRD RAVRARHIDE VLDAEPQLLL DNGGDLFLRY
LERPYAGLLG GTEETTSGRQ VLEPHRAALA MPVLVINDSP IKAFAENQHG VGQSVLESYL
RFTNRITHGE RVVVVGYGWC GRGVADTFRN ARSQVTVVDA DPVMCLRALM DGFRTTSLEA
ALVDADVVIT VTGGGRVLGP EHTHLLRDGA VLANAGHEPD EIDLDAIEAL PGVTAGETLP
DVRSVTFTDG RTVHVLGSGH MVNLAGPGAR GNSIQSMDIG FSLQTLCLAQ VATGQVGPQD
CVVPVPRAVD VAVATGYLAL KGMV