Gene Sked_34640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_34640 
Symbol 
ID8635097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3870925 
End bp3872235 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content75% 
IMG OID 
Productflavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase 
Protein accessionYP_003316186 
Protein GI269796731 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCG TCCCCCTCTC GATCCTCGAC CTCGCACCCG TCTCTGCCGG AGCCACCGGC 
GCCCAGACGC TCCGTGACTC GGTCGCGCTC GCCGAGCGGG CCGACGCGCT CGGGTACACG
CGGTACTGGT TCGCCGAGCA CCACCTGTCC GCAGGTGTCG CCTCGGCCTC GCCCGCCGTG
CTCGCGGCGC TGGTCGCCGG TCGCACCGAG CACCTGCGCG TCGGCACGGG CGCCGTGCTG
CTGAGCACCA CGAGCCCGCT CGTGGCCGCC GAGCAGCTCG CGACGGTCGC CGCCCTGCAC
CCGGGTCGCG TGGACCTCGG TGTCGGACGG GCCTTCACCC CGCCGCCGAA GCCAGCCGCC
CAGCCTGACG CGGAGGGCTC CTCGACCCCG CCGGCCGCAC CCCCGCGCAA GCCGGCAGCC
CCTGCCCGGG ACGTCGACGG TCTGCACGTC CCGTCCGCCC CGCCCATCGA CTTCACCGAC
TCCGCCCTGC GCGAGCGTCT CCTCGGCCAG CAGCGCGTCG TCTCCGCCAA CCGCCAGCCC
GCGCCCTTCC GCGACGAGCT CGAGCTGGTC CTCGGCCTCC AGGCCGGGAC CTACACGGAC
GCCGACGGCG TGCCCCACGT GAGTGCCCCG GTCGAGGGCA CGGACGCGCA GCTCTGGGTG
CTCGCGTCGA GCGGCGGGGA GTCCGCCGAG GTGGCCGGCG CGCTCGGTCT GCCGCTCGTC
GCCAACTACC ACGTGAGCCC CGCGACCATC CTCGACACCG TCGCGTCCTA CCGCGCGGCC
TTCGTGCCCG GTGTCCTCGA CGCGCCCTAC GTGATCGTCT CCGCGGACGT GCTCGTCGCA
GAGACCGAGC TCGAGGCGAC GCACGCCGGC GCGCCCTTCG CGGAGTGGGT GCTGTCCATC
CGCACCGGCC TCTCCGGCGC CATCGCGTAC CCGACACCCG AGGACGCCCT CGGCCGCGAG
TGGACCGAGG CCGAGACGGC CCTCGTGCTC GACCGCACGG CCACCCGGTT CGTCGGCTCG
CCCGAGCAGG TCGTCGCGCG TCTCGAGGCG CTCCAGCGCG TGACCGGCGC CGACGAGATC
CTCACGACCA CCATCGCCTT CGACCCGGCG CACCGCGTGC GCTCGGCCGA GCTGCTCGCG
CGGGCCTGGG GCCTCGAGGC GCCTGTCTCG GGCACCGAGA GCGCAGGAGC AGCCTCCGAG
ACTGCCACGA CGGCCCGCTC CGAGACCCCG GCGCACGCCG AGGACGTCCC GGTGAGCGAT
GCCTTCGGGC AGGTCACCAC GCACCTCGTC GGGTCGGGTG CCCACTCGTG A
 
Protein sequence
MSRVPLSILD LAPVSAGATG AQTLRDSVAL AERADALGYT RYWFAEHHLS AGVASASPAV 
LAALVAGRTE HLRVGTGAVL LSTTSPLVAA EQLATVAALH PGRVDLGVGR AFTPPPKPAA
QPDAEGSSTP PAAPPRKPAA PARDVDGLHV PSAPPIDFTD SALRERLLGQ QRVVSANRQP
APFRDELELV LGLQAGTYTD ADGVPHVSAP VEGTDAQLWV LASSGGESAE VAGALGLPLV
ANYHVSPATI LDTVASYRAA FVPGVLDAPY VIVSADVLVA ETELEATHAG APFAEWVLSI
RTGLSGAIAY PTPEDALGRE WTEAETALVL DRTATRFVGS PEQVVARLEA LQRVTGADEI
LTTTIAFDPA HRVRSAELLA RAWGLEAPVS GTESAGAASE TATTARSETP AHAEDVPVSD
AFGQVTTHLV GSGAHS