Gene Sked_34580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_34580 
Symbol 
ID8635091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3864624 
End bp3865052 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content72% 
IMG OID 
Productpredicted transcriptional regulator 
Protein accessionYP_003316180 
Protein GI269796725 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00510828 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.627972 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGACAG CACCGAGCGT CACCCCGGCG CTCTCGCCGC ACGACACGCA CGAGCACCAC 
GACCACCCGG AGGTCGGCCC CGCGCACCGC GACCTCATCG CCCAGGTGCT CGACACCTGG
TCGCTGCAGG TGCTCGCCGA GCTCTGCGAC AGGCCGTCGC GGTTCAACGA GCTCCGTCGG
GCGATCCCCG CCGTCACGCA GAAGTCGCTC ACCGCGACCC TGCGCCGGCT CGAGCGCAAC
GGCGTCGTCG CCCGCGAGGT CGTCGCCACC CGCCCGGTCG CGGTCCGCTA CAGCATCACG
CCCCTCGGCA AGACCTTCCG GGAGCCGGTC GACGCGCTCC TCGCCTGGAC CACAGCGCAC
ATGGCGGACG TCGAGCAGGC CCGTGAGGCC TTCGACGACG CCACCGACGC CGAGCACGAC
GTCAGGTAG
 
Protein sequence
MRTAPSVTPA LSPHDTHEHH DHPEVGPAHR DLIAQVLDTW SLQVLAELCD RPSRFNELRR 
AIPAVTQKSL TATLRRLERN GVVAREVVAT RPVAVRYSIT PLGKTFREPV DALLAWTTAH
MADVEQAREA FDDATDAEHD VR