| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_34410 |
|---|
| Symbol | |
|---|
| ID | 8635074 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 3848922 |
|---|
| End bp | 3849524 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_003316165 |
|---|
| Protein GI | 269796710 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.38267 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.633613 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGTCCC TGGGCTTCCC CGCGCCGGCG AGCACCGCGG CCTGCGAGCG TGCCGACGCC
GCCCGCAACC GCGAGCACCT GCTCGTCACG GCCCGCGCCA TCGTCGACGA GGTCGGCGTC
GACGCGCTCA CCATGGACGG GCTCGCCCGT GCCGCAGGCC TCGGCAAGGG CACGATCTTC
CGACGGTTCG GGTCCCGCGC CGGCCTGCTC CACGACCTGC TCAACGACAG CGAGCTGCAG
TTCCAGCACG GGTTCCTCTC CGGCCCGGCC CCGCTCGGGC CTGGCGCGGA CCCTGTCGAC
CGTCTCGTGG CCTTCGGGCG CGAGCGGCTG CGGCTGGTGA CGGTCCAGGG CGACATCTTG
CGCAGCGTCG AGTCCGAGTC CGCGCTGCGG TACGCCGCAC CGGCGCACGC CGCGTCCGCG
ATGCACGTGC AGATGCTCCT CGGGCAGGCC GGTGTCGACG GCGACCTCCA GGTCCTCACG
CTCACGATGC TCTCCTCTCT CGACGCTGCC CTCGTGCTCT TCGAGACCCG GGACCTGCAG
ATCGACCTCG ATCGCCTGGC CGACGCCTGG GAGGACCTGG TCCGACGGGT CACCCGAGGC
TGA
|
|---|
| Protein sequence | MTSLGFPAPA STAACERADA ARNREHLLVT ARAIVDEVGV DALTMDGLAR AAGLGKGTIF
RRFGSRAGLL HDLLNDSELQ FQHGFLSGPA PLGPGADPVD RLVAFGRERL RLVTVQGDIL
RSVESESALR YAAPAHAASA MHVQMLLGQA GVDGDLQVLT LTMLSSLDAA LVLFETRDLQ
IDLDRLADAW EDLVRRVTRG
|
|---|
| |