Gene Sked_33920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_33920 
Symbol 
ID8635025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3794474 
End bp3795631 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content69% 
IMG OID 
Productcitrate lyase beta subunit 
Protein accessionYP_003316120 
Protein GI269796665 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.878641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.357837 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCACT TCGAATACCT GAGCGAGGCT GAGATCCAGC GCTTGTTCCA CCGCGCGCCG 
CAGCCGTTCA CGGTCGACAC CGATCCCGGC ATGCTCGCCG TGGGCCTCGG CGCGACCCTC
TACAGCCCCG GTACCCGCCC GAACCTCGCC GCCGACATCG CCAAGCGCGC GGCATACGGC
GTCGTGTCCC TCGTGGTGTG CCTCGAGGAC TCGATCGCCG ACGAAGAGGT CCCCTTCGCC
GAGCAGAACA CCGTCGCCCA GCTGCGCACC TACGCGGAGA CCGGCGCCTC CGGACCGCTG
ATCTTCGTGC GGGTCCGGTC CGCCTACCAG ATCCGCCTCG TGGTCGACGG GCTCGGCGAG
CACCTGTCCG TCCTCGCCGG GTTCGTCATC CCCAAGTTCC TCGGGTCCAC GGGCGTCGAG
TTCCTCGAGG AGATCGAGGC GGCCAGCGAG CGCACCGGCC GGCGCCTCTA CGCCATGCCC
GTGCTCGAGT CGCCCGAGCT CGCCTACACC GAGACCCGCC GCGACGAGCT CGAGGGCGTC
CGCCAGCTCC TCGTCAAGCA CCGCAGCACC ATCCTCGCGG TCCGCACCGG GGCCACCGAC
CTGTCGTCCG CCTACGGGCT GCGCCGCAAC CGCGAGCTGA CGATCTACCA CGTGCACGTG
GTCGCCAACG TGATCTCCGA CATCGTCAAC GTGCTCGGCC GCGCCGGAGA CCAGGGCTTC
GTCATCACCG GGCCGGTGTG GGAGTACTTC TCGTACCAGG AGCGCATCTT CAAGCCGCAG
CTGCGCGAGA GCCCCTTCAA GGAGCACGAC GAGAAGCCGC TGCGCGCCAA GATGATCGAC
GCTGACCTCG ACGGCCTCAT CCGCGAGGTG GTCCTCGACC AGGCCAACGG GCTCACCGGC
AAGACCGTCA TCCACCCCTC GCACGTCGCC GCCGTGCACG CGCTCTCCGT GGTCTCGCAC
GAGGAGTACT CCGACGCCTG CGAGATCCTC GCCGCGACCA CCGGCGGGGT CAAGGCCTCG
CAGTACAAGA ACAAGATGAA CGAGTCCAAG CCGCACCGTG CCTGGGCCGA GCAGCTGCTG
CGCCGCGCCA CCATGTTCGG CGTCATCAAC GAGGACGTCA GCTACATCGA CGTGATCTCC
GCGAGCGACC AGCTGTGA
 
Protein sequence
MRHFEYLSEA EIQRLFHRAP QPFTVDTDPG MLAVGLGATL YSPGTRPNLA ADIAKRAAYG 
VVSLVVCLED SIADEEVPFA EQNTVAQLRT YAETGASGPL IFVRVRSAYQ IRLVVDGLGE
HLSVLAGFVI PKFLGSTGVE FLEEIEAASE RTGRRLYAMP VLESPELAYT ETRRDELEGV
RQLLVKHRST ILAVRTGATD LSSAYGLRRN RELTIYHVHV VANVISDIVN VLGRAGDQGF
VITGPVWEYF SYQERIFKPQ LRESPFKEHD EKPLRAKMID ADLDGLIREV VLDQANGLTG
KTVIHPSHVA AVHALSVVSH EEYSDACEIL AATTGGVKAS QYKNKMNESK PHRAWAEQLL
RRATMFGVIN EDVSYIDVIS ASDQL