| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_33850 |
|---|
| Symbol | |
|---|
| ID | 8635018 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 3785347 |
|---|
| End bp | 3786639 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | |
|---|
| Product | Major Facilitator Superfamily transporter |
|---|
| Protein accession | YP_003316113 |
|---|
| Protein GI | 269796658 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.150605 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.501617 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGCCCGA TCGTGTGGCC CGTCCTCGTG CCGACCACGC TGATCTTCGG CGCCGAGGGC
GCCGCGATGG TCGTCCTCGG CCTCTCCGCG ATCGCCGGCG GCGCATCGCT CGCGCTCGCG
GCCCTGGTGG TCGCGACCGT CGGCATCGGC CAGCTCGCCG GCTCCATCCC TGCGGGACAG
CTCACCACGC GCTACGGCGA GCGACGCGTG CTCGTCGTCG CGAGCCTCGC CTCGACGGTC
ACCTGGGCCG GTGCCGCCCT CGTGAGCTCG CCAGCAGCGC TCGCCGCGGT CGGGTTCGTC
GGGGGAGTCG CGTCCGCAGC CTTCGCCGTC GCCCGGCAGT CCTACACGAT CGACGTCGTG
CCCCACGCCT ACCGGGCGCG CGCGATGTCG CTCCTCGGCG GGTCCGGCCG TGTCGGGCTC
GTCCTCGGGC CGCTCGCCGG GGCGGGGCTC CAGGTCTGGT TCGGGCTCGC CGGAGGGTTC
GTCGTGGCGA GCGCTGCGGC CGCGCTCGCC GCGCTCACGC TCCTCGTCGT ACGCGAGCCG
GGCGACCGCG GGGTAGCCGG GGCGGCTGGG TCGTCCCCGG CTGCCACCGC GTCGCTGCCT
GCCACGTCGC GGGACCGTGC CGCGGCACAG GACGCCGTCG CCTCCGACCC GCGCCGGACG
ACCCGTCCGG CGACCCTGCG CGAGCTGGTG CGCGCCCACG CCTCGGTCCT CGCGACCGTC
GGCATCGGTG TCGTGGTCAT CAACCTCGCC CGCTCGCTGC GACCCGTCCT GGTGCCGCTC
GCGCTCTCCG AGGCGGGCGC CGACGCCCAC ACCACCTCGC TCGTGGTCGC CGCGGCCGCC
GCCGCCGAGC TCATGCTGTT CTACCCGGCG GGCGTCGTGA TGGACCGGTA CGGCCGACGT
GTCGTCGCCG TCTCGTGCTC GGGCGTCATG GGGGTCGGCC TGATCCTCAT GGGGGCGCTC
GGAGCCCTCG AGGGGCTGGC CGGCATCGTG GCCGGCGCCG TGCTGCTCGG TATCGGCTCG
GGCATCGGGT CCGGCGTCGT CAAGACCCTC GGGGCCGACG CGGCACCGGT GCGTGACCGG
GCCACGTTCC TCGGCGTGTG GAACGTCCTC GGGGAGACCG GCGGTGCCGC CGGACCGCTC
GCCCTCAGCG CGCTCACCGC GGTCGCCTCG CTCGCAGGGG CCGGCGTCGT GCTCGGGGTG
GTCGCGCTCG CGGGGGCCGT GGGGCTGACC CGGTGGCTCT CACCCGGCCG TGCCGGACCG
TGGGCGCGGC CCGGAGCAGC AGCCGGCGCC TGA
|
|---|
| Protein sequence | MRPIVWPVLV PTTLIFGAEG AAMVVLGLSA IAGGASLALA ALVVATVGIG QLAGSIPAGQ
LTTRYGERRV LVVASLASTV TWAGAALVSS PAALAAVGFV GGVASAAFAV ARQSYTIDVV
PHAYRARAMS LLGGSGRVGL VLGPLAGAGL QVWFGLAGGF VVASAAAALA ALTLLVVREP
GDRGVAGAAG SSPAATASLP ATSRDRAAAQ DAVASDPRRT TRPATLRELV RAHASVLATV
GIGVVVINLA RSLRPVLVPL ALSEAGADAH TTSLVVAAAA AAELMLFYPA GVVMDRYGRR
VVAVSCSGVM GVGLILMGAL GALEGLAGIV AGAVLLGIGS GIGSGVVKTL GADAAPVRDR
ATFLGVWNVL GETGGAAGPL ALSALTAVAS LAGAGVVLGV VALAGAVGLT RWLSPGRAGP
WARPGAAAGA
|
|---|
| |