| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_33780 |
|---|
| Symbol | |
|---|
| ID | 8635011 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 3778708 |
|---|
| End bp | 3779145 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | methylmalonyl-CoA epimerase |
|---|
| Protein accession | YP_003316106 |
|---|
| Protein GI | 269796651 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.749864 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.805501 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATCA AGCTGGAGAA CGTCGGCATC GCCGTGCGCG ACCTCGACGC GACGATCGCC
TTCTTCACCG ACCTCGGGCT GACGCTCGTG GGACGCGACA CGGTCAGCGG GGAGTGGGCT
GACACCGCCG TCGACCTCGA CGGCAACCAT GCCAACATCG CCGTGCTCCA GACGCCCGAC
GGGCAGGGGA GCATCGAGCT GTTCGAGTAC ATCCACCCGG ACGCGATCGA GACGGAGCCG
ACCCGCCCGA ACGAGATCGG GATGCACCGC GTCGCCTTCT CCGTCGACGA CCTCGACGCC
GCCCTCGAGG TGGTGGCCCG GCACGGCTAC GTACCGCTGC GCGGGGTCGC GACCTACGAG
GACGTCTACC GGCTCACGTA CGTGCGCGGT CCGAGCGGGA TTATCGTGAT GCTCGCGGAG
GAGCTGGGCA AGGGCTGA
|
|---|
| Protein sequence | MSIKLENVGI AVRDLDATIA FFTDLGLTLV GRDTVSGEWA DTAVDLDGNH ANIAVLQTPD
GQGSIELFEY IHPDAIETEP TRPNEIGMHR VAFSVDDLDA ALEVVARHGY VPLRGVATYE
DVYRLTYVRG PSGIIVMLAE ELGKG
|
|---|
| |