| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_33630 |
|---|
| Symbol | |
|---|
| ID | 8634996 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 3765850 |
|---|
| End bp | 3766344 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_003316092 |
|---|
| Protein GI | 269796637 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.120194 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGACA GCCACGCGGT GCAGGACATG CTCCGTGCGC TCGACGAGTT CGGACGGGCC
CAGCGTGAGA TCGGCGCCCG CCTCGCCCGC TCGATGGACC TGCCCCGGGC AGGCATCGGC
ATCCTGCGCT ACCTGTACGC GACGGCCGAG CCGGTCTCCG TCGGCTGCGC CGCGCAGCAC
CTGCGGGTCG ACCTCTCGGT CGCCAGCCGT CAGGTCAGCG CGCTGGTCGA CGCGGGCCTC
GTGCGCCGCA CGGTCGACGA CGGCGACCGC CGCTCGCGCT CGATCGAGCT GACCGAGACC
GGCCACGCGC GCGTCGACGA GCTCAAGGAC CACGTCACCG CGCTCATGAC CGACATGTTC
TCCGACTGGG ACCCCCACGA GCTGTCCGCC GCGACGGACC ACATGGCGGC GCTCGCCCGC
ACGATCGCCG ACCACCAGGA CGAGACGCCT GCCCCGACGC AGGGCGGCTC GCCGCACGAC
CTACAGACTG TTTGA
|
|---|
| Protein sequence | MIDSHAVQDM LRALDEFGRA QREIGARLAR SMDLPRAGIG ILRYLYATAE PVSVGCAAQH
LRVDLSVASR QVSALVDAGL VRRTVDDGDR RSRSIELTET GHARVDELKD HVTALMTDMF
SDWDPHELSA ATDHMAALAR TIADHQDETP APTQGGSPHD LQTV
|
|---|
| |