Gene Sked_33620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_33620 
Symbol 
ID8634995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3764235 
End bp3765515 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content74% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003316091 
Protein GI269796636 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.224108 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGGA TCGAACGACG GACGGTGCTC CAGTTCGCTG CGCTCGCCGC CGCAGCACCC 
TTCGTCGCCC ACGGGTTGAG GACCGAGTCC GCCGTGGCTG ACGCCCCGCT CGTCGCGCCG
TCCGCCCCGG GCGTCGACGC GGCCTTCGCG TTCCTCGACG CCCTCGTCCC GCTCGCCGAG
CCCGTCCTGC CCGGCACGCC CGCACCGCCG GCGAGCCGCG CGCTGCCGCG CAGCTACTCC
CGCGGGTACC TCGGATCCAT CGGCTTCGAC GTCGCGTTCT CCTACGACTG CGCCCTGGTG
GTCCTGGCCT ACCTCGCCCG CGGCTCCGCG GCAGACGTCG AGCGCGCCAC GACCGTCGGC
GACGTCCTCG TGACGCTCCA GGAGGGTGAC GCCGAGCTCG ACGGGCTGTT CCGCAACTCC
TACATGGCGA GCCTGTCCGT CGACGACGCC GGGCTGCCCC GGATCGCCTC GCACGCCGCG
ACCACCGGGA ACCAGGCCTG GGTCGGCATC GCGCTGCTCG CGCTGCACTC CGCCGTCGAC
GACGACAGGT TCCTCGTGGC AGCCCTCCGG CTCGCCCGGA CCGTCGTGTC GACCACCTAC
GACGACCGCG GCCTGCCCGC CTTCTCCGGC GGGCGCGGCG AGGACGGCCG CGTGCTCACC
TGGCGCTCGA CCGAGCACAA CACCGACTGC TACACGTTCT TCAGCGAGCT CGCACGGGTC
ACCGCCGACG CGGAGTGGGC CGACCGTGCC GCCGACGCGC GCGCCTTCGT CGAGTCGCTG
TGGGTGCCCG AGGGCGGGTA CTTCCTCGTC GGCACGGTCG ACGACGGCGT GACCCCCAAC
GTGCACCCCA TCGCCGAGGA CGCGCAGAGC TGGACGTACC TCGCGCTGCG CGACCCCGCC
TACGCCGGGT CCCTCGACTG GGCCGCCGAG CACCTCGCCG CGCACGACGG CGACGTGCAC
GGCGTGACGG TCTGCCACGT GGCGAGCACC GACAAGGTGT GGCTCGAGGG CACGGCGCAC
CTCGCCGCGG CGCTCACCGT CCGCTCGACC GAGACCGGTG ACGCCCACGG CGAGGCCGCG
CAGGCCGCGG CGCTCCTCGA CTCCGTGTGG CTCGCGCAGG CCTCGGGTCC GTACGCCGAC
GGCATGGGCG TCCCGTCGGC GTCGTCGGAC AACCTCGACT CCGGGTTCGG CGACCTCGTG
TACTCGTCGC TGCACACCGG GAGCACCGCG TGGGCGATCA TCGCCGCGCT CGGCGCGAAC
CCCCTGGCCG TGGTCCGTTG A
 
Protein sequence
MARIERRTVL QFAALAAAAP FVAHGLRTES AVADAPLVAP SAPGVDAAFA FLDALVPLAE 
PVLPGTPAPP ASRALPRSYS RGYLGSIGFD VAFSYDCALV VLAYLARGSA ADVERATTVG
DVLVTLQEGD AELDGLFRNS YMASLSVDDA GLPRIASHAA TTGNQAWVGI ALLALHSAVD
DDRFLVAALR LARTVVSTTY DDRGLPAFSG GRGEDGRVLT WRSTEHNTDC YTFFSELARV
TADAEWADRA ADARAFVESL WVPEGGYFLV GTVDDGVTPN VHPIAEDAQS WTYLALRDPA
YAGSLDWAAE HLAAHDGDVH GVTVCHVAST DKVWLEGTAH LAAALTVRST ETGDAHGEAA
QAAALLDSVW LAQASGPYAD GMGVPSASSD NLDSGFGDLV YSSLHTGSTA WAIIAALGAN
PLAVVR