Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_33340 |
Symbol | |
ID | 8634967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 3715291 |
End bp | 3715872 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | |
Product | Flp pilus assembly protein TadC |
Protein accession | YP_003316063 |
Protein GI | 269796608 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.657455 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTCGGTG CGGTCGTCAC CGGAGGTGCC GTAGGCATCC TCGTCTGGTG CGCGACCGCG CCGTGGCGAG GGCCCCGGAC GCCGCGCACC ACCCGCCGTC AGCACGTGGG GTCCGTGCCT CCGCCGGGTG CGGACGACCT CGGTGCCGCC GCCGTGGACC CCACGGTCGT GCTCGACCTC CTCGGTGCCG CGCTCGGCGC GGGTGCCGGC GTCCCGAGAG CCCTCGGTGC CGTCGGGAGC TCGGTCGGCG GGCAGGACGG GGAGGCGCTC GAGCGGGCGG GCGCGGCGCT GCTGCTCGGT GCGGGGTGGG GACCGGCCTG GGAGGGCGCA CCCGCGAGGC TGCGGCCGGT CTCCGAGGCC CTGAGGCCCG CCTGGGTGCA CGGGGCGCCG CCCAGGGACG CGCTGCGGGT CGCGCGCGAG CGCATCGCCC ACGACGCCCG CACGAGGGCC AGGACGGCCG CCGCCCGGCT CGGGGTGCGC CTGGTGCTGC CGCTCGGCCT GTGCCTCCTG CCGGCCTTCG TCCTGCTGGG GCTCGTCCCG GTGGTCGTGG CGCTCGGGTC CGGTCTCGTC GGTGGGACCT GA
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Protein sequence | MLGAVVTGGA VGILVWCATA PWRGPRTPRT TRRQHVGSVP PPGADDLGAA AVDPTVVLDL LGAALGAGAG VPRALGAVGS SVGGQDGEAL ERAGAALLLG AGWGPAWEGA PARLRPVSEA LRPAWVHGAP PRDALRVARE RIAHDARTRA RTAAARLGVR LVLPLGLCLL PAFVLLGLVP VVVALGSGLV GGT
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