Gene Sked_33340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_33340 
Symbol 
ID8634967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3715291 
End bp3715872 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content79% 
IMG OID 
ProductFlp pilus assembly protein TadC 
Protein accessionYP_003316063 
Protein GI269796608 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.657455 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCGGTG CGGTCGTCAC CGGAGGTGCC GTAGGCATCC TCGTCTGGTG CGCGACCGCG 
CCGTGGCGAG GGCCCCGGAC GCCGCGCACC ACCCGCCGTC AGCACGTGGG GTCCGTGCCT
CCGCCGGGTG CGGACGACCT CGGTGCCGCC GCCGTGGACC CCACGGTCGT GCTCGACCTC
CTCGGTGCCG CGCTCGGCGC GGGTGCCGGC GTCCCGAGAG CCCTCGGTGC CGTCGGGAGC
TCGGTCGGCG GGCAGGACGG GGAGGCGCTC GAGCGGGCGG GCGCGGCGCT GCTGCTCGGT
GCGGGGTGGG GACCGGCCTG GGAGGGCGCA CCCGCGAGGC TGCGGCCGGT CTCCGAGGCC
CTGAGGCCCG CCTGGGTGCA CGGGGCGCCG CCCAGGGACG CGCTGCGGGT CGCGCGCGAG
CGCATCGCCC ACGACGCCCG CACGAGGGCC AGGACGGCCG CCGCCCGGCT CGGGGTGCGC
CTGGTGCTGC CGCTCGGCCT GTGCCTCCTG CCGGCCTTCG TCCTGCTGGG GCTCGTCCCG
GTGGTCGTGG CGCTCGGGTC CGGTCTCGTC GGTGGGACCT GA
 
Protein sequence
MLGAVVTGGA VGILVWCATA PWRGPRTPRT TRRQHVGSVP PPGADDLGAA AVDPTVVLDL 
LGAALGAGAG VPRALGAVGS SVGGQDGEAL ERAGAALLLG AGWGPAWEGA PARLRPVSEA
LRPAWVHGAP PRDALRVARE RIAHDARTRA RTAAARLGVR LVLPLGLCLL PAFVLLGLVP
VVVALGSGLV GGT