| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_33060 |
|---|
| Symbol | |
|---|
| ID | 8634939 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 3680143 |
|---|
| End bp | 3681006 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | ABC-type multidrug transport system, permease component |
|---|
| Protein accession | YP_003316035 |
|---|
| Protein GI | 269796580 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.486477 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.155954 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGGA CCTCGAAGGT CCTCTCGACA GGACTGCTCC GTGCCCGGCT CGAGCTCCGG
GTGCTCGTCC GCAACCGGTC GGTCCTGTTC TCGCAGCTGC AGCTCGCCAA CGTGGTGATG
CTCGTGGTGC TCGGCAAGGT CATCGGCGAC GACCCGATCG GCGGCTCCGG GCAGCCGCAG
GTGACGCTGT TCGTCGCGGG CTTCGTGGCG CTGGCCGTCT GCCAGGCCAC GATCCTGCAG
TTCCCCCTCG CGCTCGCCAC CGACCGTGAG GACGGGACCC TGCTGCGGGC CCGCGGCATC
CCGGACGGCG TCGCGACCTA CCTGGTCGGC AGGGTGACGG TCGTCCTGAT CACTGTCGTG
GTGAACGTCG CGCTCGTCCT GGTCGTGGCG GCGCTCGTGC TCCGCGCCCC GATGCCCTCG
ACCGTGGGTG CCTGGTTCAC CCTGCTGTGG GTGCTCGCGC TCTCCACCTG CGCGGCCACG
CTGCTCGGCG CAGCCGTGGG GGCCATGCTC CCCGGTGCGC GGCAGGGGAC GGGCTGGGTG
CTCCTCCCGC TCATGGGTCT CATGGTGATC TCCGGGACGG TCATCCCCTT CACCCTCATG
CCGGGCGTGG TGCAGGCGGT CGCCTCGGTG TTCCCGCTGC GCTGGATGGC GCAAGGGGTC
CGGTCGGCGC TCTACGAGCC GGCCTACGCC GCCTACGAGG TGGCCGGGAG CTGGCAGCAC
GCCGAGACCG CCGGTGTGCT CCTCGTCTGG GTCGTGGTCG GTGCGGTCGT CGCACCGCGC
CTCATCGCAC GCACCACCCG CAGGGAGACC GGCAGCGCGC TCGAGGAGCG CCGTGACGAG
GCCAGCCGCC GGGTCGGGAT CTGA
|
|---|
| Protein sequence | MSRTSKVLST GLLRARLELR VLVRNRSVLF SQLQLANVVM LVVLGKVIGD DPIGGSGQPQ
VTLFVAGFVA LAVCQATILQ FPLALATDRE DGTLLRARGI PDGVATYLVG RVTVVLITVV
VNVALVLVVA ALVLRAPMPS TVGAWFTLLW VLALSTCAAT LLGAAVGAML PGARQGTGWV
LLPLMGLMVI SGTVIPFTLM PGVVQAVASV FPLRWMAQGV RSALYEPAYA AYEVAGSWQH
AETAGVLLVW VVVGAVVAPR LIARTTRRET GSALEERRDE ASRRVGI
|
|---|
| |