Gene Sked_32940 details

Gene Information

• Locus tag: Sked_32940
• ID: 8634927
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sanguibacter keddieii DSM 10542
• Kingdom: Bacteria
• Replicon accession: NC_013521
• Strand: +
• Start bp: 3669632
• End bp: 3670378
• Gene Length: 747 bp
• Protein Length: 248 aa
• Translation table: 11
• GC content: 67%
• Product: predicted membrane protein
• Protein accession: YP_003316023
• Protein GI: 269796568

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.0704439
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 22
• Fosmid unclonability p-value: 0.479689
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

TTGGAGCCCG TCATCCCCAG CCTCGTCCTC GGCGTCATCG GCATGAACGT CTTCGCGGTC 
GTGCTCGTGG TCGCCCGCGC CCGCGCCTTC CACCGGCCCC TGTACAAGCC GATGCTGCTC 
AACATCGGCC TGTCGATCCT GCCCGTCTTC GTGCTGGTCG TCGGTCTCGT CGCGACCCTC 
GTGTCGCTCG CTGCGTCTCG AGGCGACGCC GTCGACAGCC CGATGCACGT CCTGTCGGTG 
GTCATCGCCG TCGTCAGTGC GCTCGTCTGG CTGCTGCTGC TCCCGAACGC CAGCTACCTC 
ATCACCGAGC TCAACCTCAG CCACCGCACC GACGACGACC CGACGCCGCT CTGGTACGAC 
ATCGTCCTGG TCATCACCCT CGCGATGTCG GGCGTGCTCA ACCTCGTGGT CAACGTGCTG 
GCGGTCCAGG TCCTGTACGG GGTGATGCGG TACCCGGACG ACGACGTCGC CGGCCTGACC 
CAGCCCGACA CCCGGCTCGT CGCCGTGGCC ATCATCATGC TCAGCGCCGT CGGCGTGTAC 
CTCGGCCGGT ACCTGCGCCT CAACAGCTGG GACGTGACGC ACCCCGGGTC GTTCCTGCGC 
AAGGTGCGCG ACCACTTCAC CCAGCAGGGC GCGGTCAAGA CCTTCCTGGG CTTCACCCTC 
GTCCACACCG TGTTCATCGC GCTGCTCTAC CTGACGATCG GCGGGACGAT CATCGACCTG 
GTCGTCGCCT ACCAGCAGAG CCGCTGA 

 

Protein sequence

MEPVIPSLVL GVIGMNVFAV VLVVARARAF HRPLYKPMLL NIGLSILPVF VLVVGLVATL 
VSLAASRGDA VDSPMHVLSV VIAVVSALVW LLLLPNASYL ITELNLSHRT DDDPTPLWYD 
IVLVITLAMS GVLNLVVNVL AVQVLYGVMR YPDDDVAGLT QPDTRLVAVA IIMLSAVGVY 
LGRYLRLNSW DVTHPGSFLR KVRDHFTQQG AVKTFLGFTL VHTVFIALLY LTIGGTIIDL 
VVAYQQSR