Gene Sked_32720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_32720 
Symbol 
ID8634905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3643452 
End bp3645101 
Gene Length1650 bp 
Protein Length549 aa 
Translation table11 
GC content76% 
IMG OID 
Productmethyltransferase family protein 
Protein accessionYP_003316001 
Protein GI269796546 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.676312 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.572008 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGA CCACCGCCAG CAGCCCCGCG CCCTCCGCCG ACCCGACGCT CGTCGCCCGG 
CTCCGGGCGG ACCTCGAGGT GAGCGGCTAC ACCGTCGAGG GCGTCGAGTC GGCCCTCGGC
CCGGTCGCCG CCAGCGCCCT GCACCGTGAG CAGGCGCTCC CCGCGCTCCG GGCCAGCGCC
CCCGGACCGA CGGACGACGC CGCGCAGCCG GCGGTCCTCA CGCTCACCCG GCTCTTCGTG
CTCGGGCAGG CCGTCCCCGC CGTCGCGCTC GACGCCGCCC TGCCCTCGCT CACGGCCGCA
GGTGCCGCAG AGCTCGGGCT GGTCGCCCTC TCCGGCGAGG CCCCGCAGGG CTCCCAGGAC
GCCGAGCCGA CAGCCCGTCC TCTCGTCGAC CTGCGCCCCT ACGCCGCGCA CGACGCGCGG
GGTCCGGTCG ACTGGTGGCT GGCCTCGGAC CTCGGCGAGC TCGCCACGGG TGGTCGCCTC
GCGGGCGACC ACGTCCTCGG AGCCGGGGGA GCGTCGATCA CCCTCGCTCA GGTGACGGTG
CGCTCGCCGC GGACCCGGGT CCTCGACCTG GGGACGGGGT GCGGCATCCA GGCGCTGCAC
GCGTCCCGGC ACGCGCAGAC CGTGGTCGCG ACGGACATCT CCGAGCGGGC CCTGCGCTTC
GCGGCCTTCA ACGCGGCGCT CGACGGCGTG CGTCTCGACC TGCGCCTGGG CTCGATGCTC
GAGCCCGTGG CCGGCGAGGA GTTCGACCTC GTGGTCTCCA ACCCACCGTT CGTCATCACC
CCGCGGCGCG CGGCCACGGA CGGGGCAGGC GGCGCGGAGG TCCCGTCCGG TGACGACAGC
CTCCCCGGCG AGATCCCCAC GTACGAGTAC CGCGACGGTG GTCGCTCGGG CGACGACCTC
GTCCGGGACC TCGTGACCGG GGTCGGCGCC GTCCTCGCCC CCGGCGGGGT GGCGCAGATG
CTCGGCAACT GGGAGCACCG CGCCGGTGAG CCGTGGACCG AGCGGGTCGG TCGGTGGCTC
GACGAGTCCG GGCTCGACGG CTGGGTGATC CAGCGCGAGG TCCTCGACCC GGCCGAGTAC
GCCGAGACGT GGATCCGTGA CGGCGGGACC ACCCCCGAGC GCGAGCCCGA GGCCTGGGCG
GCGGCGTACG GGGCGTGGCT CGACGACTTC GCGTCGCGCG ACGTCGAGGC GATCGGCTTC
GGCATCCTCC TGCTGCGCCG CCCGCTCCCG GGCGAGCAGG TCACGCTGCG CAGGCTGGAG
GAGCACACCG GGTCGGTCCG CCAGCCGCTC GGCGCGCACC TCGAGACCAG CCTCGCCGCG
CACCTGTGGC TCGAGACCCT CGACGACGCC GCCCTCGGCG CGCAGCGCCT GGTCGCGGCG
GCGGACGTGA CCGAGGAGCG GTTCTACACG CCCGGTGCGG CCGACCCGAA CATCGTCATC
CTGCGCCAGG GCGACGGCCT CGGGCGCGGC GTGCACGCGT CGACGTCGCT CTCGGCCCTC
GTCGGTGCCT GCGACGGCGA GCTCTCCGTC GCACAGATCG TCACGGCGAT CGCCTCGATC
TTCGAGGTCT CCGCGGACGA CCTGTCGGCC GAGCTGCTGC CCGCGGTCCG CGGGCTCGTC
CGTGACGGCT TCCTCGCGGA GCAGGGCTAG
 
Protein sequence
MSQTTASSPA PSADPTLVAR LRADLEVSGY TVEGVESALG PVAASALHRE QALPALRASA 
PGPTDDAAQP AVLTLTRLFV LGQAVPAVAL DAALPSLTAA GAAELGLVAL SGEAPQGSQD
AEPTARPLVD LRPYAAHDAR GPVDWWLASD LGELATGGRL AGDHVLGAGG ASITLAQVTV
RSPRTRVLDL GTGCGIQALH ASRHAQTVVA TDISERALRF AAFNAALDGV RLDLRLGSML
EPVAGEEFDL VVSNPPFVIT PRRAATDGAG GAEVPSGDDS LPGEIPTYEY RDGGRSGDDL
VRDLVTGVGA VLAPGGVAQM LGNWEHRAGE PWTERVGRWL DESGLDGWVI QREVLDPAEY
AETWIRDGGT TPEREPEAWA AAYGAWLDDF ASRDVEAIGF GILLLRRPLP GEQVTLRRLE
EHTGSVRQPL GAHLETSLAA HLWLETLDDA ALGAQRLVAA ADVTEERFYT PGAADPNIVI
LRQGDGLGRG VHASTSLSAL VGACDGELSV AQIVTAIASI FEVSADDLSA ELLPAVRGLV
RDGFLAEQG