Gene Sked_32580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_32580 
Symbol 
ID8634891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3627208 
End bp3628344 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content75% 
IMG OID 
ProductDNA polymerase III, gamma/tau subunit 
Protein accessionYP_003315987 
Protein GI269796532 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.571929 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGTGT GGGACGACGT CGTCGGGCAG GACTCGGCCG TCGCGACGCT CCGCGGGGCG 
ATCGCCGACC CGTCGGCCAT GACGCACGCC TGGCTGCTCA CCGGACCGCC CGGCTCCGGC
CGGTCGAACG CGGCCCGCGC CTTCGCCGCG GCCCTGCAGT GCGAGCAGGG CGGCTGCGGG
CACTGCCACG CCTGCACCAC GACGCTGTCC GGGACGCACG CCGACCTCAC CGTCGTCGCG
ACCGAGAAGG TCACCATCGC GATCGACGAG GTGCGCTCGC TCATCTCGCT CGCCTCGCGC
TCGCCCTCCC AGGGGCGCTG GCGCGTCATC CTCGTCGAGG ACGCAGACCG CATGGCCGAG
CGCACCACCA ACGTCCTGCT CAAGGCCATC GAGGAGCCGC CGCCGCGCAC CGTGTGGCTG
CTCTGCGCGC CGAGCCCGCA GGACGTCATG GTCACCATCC GGTCCCGCTG CCGCGGGGTC
ACGCTGCGCA TCCCGCCGGT GGCCGACGTC GCCGCCCTGC TCGAGGCGCG GGACGGCGTC
GACCCGGTCG TGGCCCTGGC GAGCGCCCGC GCGGCGCAGT CGCACATCGG CCTCGCGCGC
CGCCTCGCCC GCGACGCCGG TGCCCGCCAG CGCAGGTCGT CGGTGCTGTC GATCGCCCGA
CGCATCCGCG GGGTGCCCGA CGCCGTGATC GCGGCCGGCG AGCTCGTCGA GGTCGCCCAG
GCCGAGGCCA AGGCGGCGAC CGAGGAGCGC GACGCCACCG AGAAGGCCGA GCTGCTGCGG
TCCCTCGGTG CCGACGGCGG ACAGACCCTC CCGCCGTCGC TGCGCTCGCA GGTCAAGCAG
CTCGAGGACG ACCAGAAGCG GCGCGCCACC CGGCGCCAGC GCGACGTGCT CGACCGGTCG
ATGGTCGACC TGCTGTCCCT GTACCGCGAC GTGCTGGTCG TCCAGCTCGG TGCCGAGGTC
GACCTCGTCA ACACCGAGAT CGCGGAGACG GTGCGCACGC TCGCGGAGGA GTCGACGCCC
GAGCAGACCG TGCGTCGCAT GGACGCGATC GGTGTGGCGC GCACGCGGCT CGGGGGCAAC
GTGTCGCCCG TGCTCGCCCT CGAGGCGATG GCCATCGCCC TGCGCCCCCA GGGCTGA
 
Protein sequence
MSVWDDVVGQ DSAVATLRGA IADPSAMTHA WLLTGPPGSG RSNAARAFAA ALQCEQGGCG 
HCHACTTTLS GTHADLTVVA TEKVTIAIDE VRSLISLASR SPSQGRWRVI LVEDADRMAE
RTTNVLLKAI EEPPPRTVWL LCAPSPQDVM VTIRSRCRGV TLRIPPVADV AALLEARDGV
DPVVALASAR AAQSHIGLAR RLARDAGARQ RRSSVLSIAR RIRGVPDAVI AAGELVEVAQ
AEAKAATEER DATEKAELLR SLGADGGQTL PPSLRSQVKQ LEDDQKRRAT RRQRDVLDRS
MVDLLSLYRD VLVVQLGAEV DLVNTEIAET VRTLAEESTP EQTVRRMDAI GVARTRLGGN
VSPVLALEAM AIALRPQG