| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_31400 |
|---|
| Symbol | |
|---|
| ID | 8634773 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 3490254 |
|---|
| End bp | 3491036 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein |
|---|
| Protein accession | YP_003315871 |
|---|
| Protein GI | 269796416 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.308782 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.144214 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCTCC AGCAGCTCTT CGGCCTCGAC GGCCGCACCG CCCTCGTCAC CGGAGGCAGC
TCCGGGATCG GCCGCGGGAT CGCCCTGGCT CTCGCAGGTG CCGGGGCGCA CGTCCTGGTC
GCCGCGCGCA CGGTCGAGGC CCTCGACGCG ACGGTCGCGC ATGTCCGCGA CGAGGGCGGG
TCGGCCGAGC GGCTGGTCGC CGACCTCTCG ACGCGGGAGG GGGCGCACGC CCTGGCCGAG
GCGGCAGAGG CTGCGGCCGG CAGGCGGGAC GACGGTGGTG TCGACGTCCT GGTGTGCTCG
GCGGGGATCA ACCTGCGCCC GCCCATGCCC GAGCTCGACG AGGCCGTGTG GGACGCCACC
ATGGCGGTGA ACCTCGACGC GCCCTTCGTG CTCGGTCAGC GCCTGGCCCC GGGGATGGCC
GCGCGCGGGT ACGGGCGACT GGTCCACATC AGCTCGCAGC AGGCGCACCG GCCCTTCGGC
GCGAGCGGCG CCTACGGGGT CTCCAAGGCG GCCCTCGAGG CGCTCGCCCG GTCGCAGGCC
GAGGCGTGGT CGCCGCACGG TGTCACGGCC AACGTCCTCG TACCCGGCTT CGTCCCGACC
GCGCTCAACC GCCGGCTCTC GAGCGACCCC GCCACGGTCT CCGCGCTCGC CGCCCGGACC
CTGGTCGGCC GCAACGGGCA CCCGGACGAC TTCGCCGGCG CCGCGGTGTT CCTCGCCAGC
GGCGCGTCGG CCTACGTGAC GGGCCAGTCC ATCGCCGTCG ACGGCGGGTT CTCGATGCAC
TGA
|
|---|
| Protein sequence | MDLQQLFGLD GRTALVTGGS SGIGRGIALA LAGAGAHVLV AARTVEALDA TVAHVRDEGG
SAERLVADLS TREGAHALAE AAEAAAGRRD DGGVDVLVCS AGINLRPPMP ELDEAVWDAT
MAVNLDAPFV LGQRLAPGMA ARGYGRLVHI SSQQAHRPFG ASGAYGVSKA ALEALARSQA
EAWSPHGVTA NVLVPGFVPT ALNRRLSSDP ATVSALAART LVGRNGHPDD FAGAAVFLAS
GASAYVTGQS IAVDGGFSMH
|
|---|
| |