| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_31230 |
|---|
| Symbol | |
|---|
| ID | 8634756 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 3472610 |
|---|
| End bp | 3472954 |
|---|
| Gene Length | 345 bp |
|---|
| Protein Length | 114 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | flagellar hook-basal body protein |
|---|
| Protein accession | YP_003315854 |
|---|
| Protein GI | 269796399 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.571171 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.135684 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATCC CCGCGATCGA GGGCGTGTCC CTCTCCGGCG CGGGCGGCGT CTCGCCGACC
GGCTACCTGT CCTCCCCGGA CGTCATCGGG CGTCCCGAGG GCGCCTCCGG CGTCTCGGGC
ACCTCGAGCG CCTTCGGCGA GGTCCTCACC GGGGCCGTCG GCAACCTGCA GTCGCTCCAG
GAGAAGTCGA ACGCCCTCGC GGTGCGCGCC GTCACCGGTG ACCTCGACGA CATCCACGAC
TACACCATCG CCTCATCCGA GGCGAAGCTG ACCCTCGAGC TCACCGCCGC CGTCCGGAAC
AAGGCCGTCG AGGCCTTCTC CGAGATCATG AGGATGCAGG CCTGA
|
|---|
| Protein sequence | MSIPAIEGVS LSGAGGVSPT GYLSSPDVIG RPEGASGVSG TSSAFGEVLT GAVGNLQSLQ
EKSNALAVRA VTGDLDDIHD YTIASSEAKL TLELTAAVRN KAVEAFSEIM RMQA
|
|---|
| |