| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_31090 |
|---|
| Symbol | |
|---|
| ID | 8634742 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 3459463 |
|---|
| End bp | 3460410 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | flagellar motor switch protein |
|---|
| Protein accession | YP_003315840 |
|---|
| Protein GI | 269796385 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.854888 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.579605 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCTCT TCGTGACGGT CCAGGACAAG GCGCGCCCCG CTGTGCGCCG ACAACGCCCA
GCCCAGCCCG AGGCGTACGA CTTCCGACGC CCCATGACGC TCGCCCGCGA GCACGGACGC
GCCTTCGAGA TGGCGTTCGA GACCTTCGCC CGCCAGTGGG GCACCCAGCT GACCTCCCGC
CTGCGGGTGA TGGTCGGCGT GGGGCTCGAC GGCGTCGAGA TGGTCTCGTA CGACGAGTAC
GTCCGCCGCC TCCCCAACCA CACCACGATG GTGCTCTGCA GCATCGAGAC CACGCGCTCG
ACGGCCGTGC TCCAGGTGGC CTCCGAGACC TCGATGCTCT GGGTCGACTA CGTGCTCGGC
GGACCCGGCC TGGTCCGCGA AGAGCTCCCG CGCGAGCTCA CCGAGATCGA GACCACGCTC
ATCACCGACA TGCTGTCGGG GGCCCTGGCC GACCTGCGCT ACGCCTTCGT GGCCGTCGTC
CCCCTCGACG TGCGCGTCAA GGCGATCCAG TACAACCCGC AGTTCGTGCA GGCCGCCCCG
GCCTCGGAGG CCGTGATCGT CGCGACCTTC ACCCTCACCG TCGCCGAGCG CCCCACGACC
GCGACGCTCA TGATCCCGGC CGACGTGCTG CTCGCCCCCA TGCGGGCCGG CGAGGGCGTC
GTGCAGCGGA GCAAGGACGA GCTGGCCGAG GCCGCCGCCG CGAGCGACCG CCTCCACCGC
ACGATGAGCA CCGTCCCCGT CGACGTGCAC GTGCGGATGC GCCCCGTGAC GGTCCACCCG
CGCGACGTCG TCGACCTCAC GGTCGGCGAG GTCATCCACC TGAACCACCC CGTGTCCCGC
CCCCTCGACG TGGTGGTGGA CGGCATCGTC CTCGCCCACG GGGTCGCAGG GAACAACGGA
CGCCAACTTG CCTGCAAGAT CGTGGACTCT GAAGGAGAAG ACCGATGA
|
|---|
| Protein sequence | MVLFVTVQDK ARPAVRRQRP AQPEAYDFRR PMTLAREHGR AFEMAFETFA RQWGTQLTSR
LRVMVGVGLD GVEMVSYDEY VRRLPNHTTM VLCSIETTRS TAVLQVASET SMLWVDYVLG
GPGLVREELP RELTEIETTL ITDMLSGALA DLRYAFVAVV PLDVRVKAIQ YNPQFVQAAP
ASEAVIVATF TLTVAERPTT ATLMIPADVL LAPMRAGEGV VQRSKDELAE AAAASDRLHR
TMSTVPVDVH VRMRPVTVHP RDVVDLTVGE VIHLNHPVSR PLDVVVDGIV LAHGVAGNNG
RQLACKIVDS EGEDR
|
|---|
| |