Gene Sked_31080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_31080 
Symbol 
ID8634741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3458723 
End bp3459466 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content76% 
IMG OID 
Productflagellar motor switch protein FliN 
Protein accessionYP_003315839 
Protein GI269796384 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.713514 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.558701 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCG CTGACGCTGG AGCCGCCGAG ACCACCGAGC TGGTCCGAGC CGCCGCCGAG 
GCGCTCGCCC GCCTCGTCCC CTCCGACGTG CCGCTCGTCG TCTCGCCGTG CGAGCCGGGC
ACCGGCCCGG GCGCCGACGA GGTCGCCGTG ACCGCGTCGC TCGTGGGCAC CCGCAGCGCC
GACCTCGCGG TCATCGCGAA GACGGCGATC GAGGAGGCCC TCGCCGGTGC GGGCGCCGGC
GCGCTCGTGT CGGTCGCCGA CGCGCTCCGC CCGGCCCTCG AGGCCGCGTC CGCGACGCTC
GGCGAGGGAG TCCTCGGCGA GGCCCAGATC CGCGACGCCG GCACCGCCTT CGGCGCCGAC
GACGTGCACG TCTTCGCCCT CGAGGCGGCA GGCGTGGTCC GCGGCTGGTT CGGCCTGCGC
CTGCGCGCCG ACCAGGACGT CGTGCCCGCA GCACAGGCCG GGGCCGCCGG CACCTCGAAG
GGAGCCTCGG TGGGCGACAA CCTCCGGCTC CTCTACGACG TCGAGATGAC CCTCTCCGCC
GAGATCGGCC GCGCCAAGCT GCCCGTCCGC CAGGTGCTCG AGCTCGTCCC CGGCGCCGTC
ATCGAGCTCG ACCGGGTCGC CGGCAGCCCG GCCGACCTCA TGGTCAACGG TCGCCTCATC
GCCCGCGGCG AGGTCGTCGT CATCGACGAG GACTACGGCC TGCGCATCAC CGAGATCGTC
GACCTCGCGG AGGCCTCGGC CTGA
 
Protein sequence
MNTADAGAAE TTELVRAAAE ALARLVPSDV PLVVSPCEPG TGPGADEVAV TASLVGTRSA 
DLAVIAKTAI EEALAGAGAG ALVSVADALR PALEAASATL GEGVLGEAQI RDAGTAFGAD
DVHVFALEAA GVVRGWFGLR LRADQDVVPA AQAGAAGTSK GASVGDNLRL LYDVEMTLSA
EIGRAKLPVR QVLELVPGAV IELDRVAGSP ADLMVNGRLI ARGEVVVIDE DYGLRITEIV
DLAEASA