Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_30780 |
Symbol | |
ID | 8634711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 3426369 |
End bp | 3427079 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | Mn-dependent transcriptional regulator |
Protein accession | YP_003315809 |
Protein GI | 269796354 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.449157 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGACC TGATCGACAC CACCGAGATG TACCTGAAGA CGATCTACGA GCTGACCGAA GAGGGCATCG TGCCGCTCCG GGCGCGCATC GCGGAGCGCC TGGGGCACTC GGGCCCGACG GTCTCGCAGA CGGTGGCGCG CATGGAGCGC GACGGTCTGG TCGTCGTGAG CGGTGACCGT CACCTCGAGC TGACCGAGGT CGGGGCCACC AAGGCCATGC GCGTCATGCG CAAGCACCGG CTCACCGAGC GCCTCCTCAC CGACGTCATC GGGCTCGACT GGGCCTTCGT CCACGAAGAG GCCTGCCGCT GGGAGCACGT GATGAGCGAC CGCGTCGAGA AGCGCCTCAT CGACCTGCTC GACCACCCGC ACTTCTCCCC GTACGGCAAC CCGATCCCCG GCCTCTCCGA GCTCGGTGAG GTGGCGCCCG CCGTCGACTT CCTCGACGGT GTCGAGTCGC TCCCGGTGGT CGTCTCGCGC CGCGCGCTCG CGGACGGCCC GTTCTCCGCG ACCGTGGCCC GTCTCGGCGA GCCGCTGCAG ACGGACGTGG AGCTCCTGGA GCGCCTGTCG TCGGCCGGCG TCGTCCCGTC GGGAGAGATC GTCGTCACGA TCCTCGAGTC CGGCGCGGGT GTGTCGGTGG GTGTGGAGGG CGCTGACCTG GTACTCGATC TGCCCGAAGA GGTCTCCCGT CACATCTTCG TCGCCAGGTG A
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Protein sequence | MSDLIDTTEM YLKTIYELTE EGIVPLRARI AERLGHSGPT VSQTVARMER DGLVVVSGDR HLELTEVGAT KAMRVMRKHR LTERLLTDVI GLDWAFVHEE ACRWEHVMSD RVEKRLIDLL DHPHFSPYGN PIPGLSELGE VAPAVDFLDG VESLPVVVSR RALADGPFSA TVARLGEPLQ TDVELLERLS SAGVVPSGEI VVTILESGAG VSVGVEGADL VLDLPEEVSR HIFVAR
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