Gene Sked_30600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_30600 
Symbol 
ID8634694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3408467 
End bp3409252 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content77% 
IMG OID 
ProductSAF domain-containing protein 
Protein accessionYP_003315793 
Protein GI269796338 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0434873 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCCGCG GCCCCGGCGC CGGTGCCGGC GCCGCACGCG ATGCGGTCTC CGGCCCGCGC 
TCCCCCTCCC GCCCGCAGAC CGCGGACAGG TCGGGGACGT CGGCGGGCGC ACGGCTCGTC
CCGCCGCGGG TCCGGCGCCG TGCGCGGGCT GAGCTCTGGC GTCGTCGGCA CGTCGTCGCA
GCCCTCGTCG TCGGCCTCGC GACGACGCTC GTGGTGCACA GGCTGAGCCC GACGCCAGAA
CCGCGCGACC CCGTGGTCGT GGCCTCGACG GCGCTGCCTG CCGGGACGAC GCTCACCGCA
GACCACCTCC GGACGGTCCG GCTGCCGAGC GCGGTGACCC CCGAGGGCGC GCCCGACGAT
GCCGACACCG TCGTCGGCCG GACCCTGGCG GTCCCCGTGA CCACCGGCAC CGTGCTCGGT
GACACCCTGC TGGTCGACGA CACGTCCACC GGCCCGCCCG GGACCGTCGT CGCCGCGGTT
CGGCTGGCCG AGCCTGCCCT CCTCGCGGTG CTGACACCCG GCACCCGCGT CGACCTGCTG
GCCGCGACGC CGCTCCACGA CCACGGCGAG GGCACGTCGA CCGCCGCGGC GACCACGCTC
GCCGTGCGGG CACTCGTGCT GCCGACGCCG GCAAGCCCCC AGGAGGAGAC CGGGTTCCTG
TCGGGCGCAG GTGGGACCGC GCCAGGCTCG TCGGACCTCT TGCTCGTCGC CGTGACGCCC
GACGAGGCGA CCTACCTCGC GAACGTCGCG GGACGTCAGG CCGTCAGCGC GGTCGTCGTG
CGATGA
 
Protein sequence
MSRGPGAGAG AARDAVSGPR SPSRPQTADR SGTSAGARLV PPRVRRRARA ELWRRRHVVA 
ALVVGLATTL VVHRLSPTPE PRDPVVVAST ALPAGTTLTA DHLRTVRLPS AVTPEGAPDD
ADTVVGRTLA VPVTTGTVLG DTLLVDDTST GPPGTVVAAV RLAEPALLAV LTPGTRVDLL
AATPLHDHGE GTSTAAATTL AVRALVLPTP ASPQEETGFL SGAGGTAPGS SDLLLVAVTP
DEATYLANVA GRQAVSAVVV R