Gene Sked_30550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_30550 
Symbol 
ID8634689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3402131 
End bp3402814 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content74% 
IMG OID 
Productacetyltransferase, ribosomal protein N-acetylase 
Protein accessionYP_003315788 
Protein GI269796333 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.926933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTGTGG TCTGGGCGCC GCGCTGGCCG GTGGTCCTGC GAGACGACTC GCTGAGCACC 
CCCGGCGGTA CCCTGCTGCT GCGCCGGCTC CGCCGTGCGG ACCGCGATGC CTGGATGGAC
CTGCGCGCAG ACAACCGGGA CTGGCTCGAG CGCTGGGAGG CGACGACGCC GGAGCCGACC
GGGCGCGACC GCGACGGCCG CTACCGCGGC GGGTGGCCCG GCAGGACGCA GGAGACCAAG
CCACCGAGCT TCACGGGGTA CGTCCGTGCG CTCGACCGTG CGGCCAAGGA CGGCTCGACG
CTCCCGTTCG CGGTCGAGCT CGACGGGGAG CTCGTCGGGC AGCTCACGGT CTCCTCGATC
ACCTACGGCT CGCTGTGCTC CGCCAGCATC GGGTACTGGG TCGGCGAGCA CGTGGCAGGG
CGGGGAGTCA CGCCGACGGC AGTGGCCATG GCGGCCGACC ACTGCTTCTT CGAGCTCGGG
CTGCACCGCG TCGAGGTCAA CATCCGTCCC GAGAACGTGC CGAGCCTGCG CGTCGTCGAG
AAGCTCGGGC TGCGCGACGA GGGGCTGCGC GAGGCGTACC TGCACATCCA GGGACGGTGG
TGCGACCACC GCACCTTCGC CGTGACCGCC CCCGAGGTGC CCGACGGGCT GCTCGCGCGC
TGGCGGGGCG CGCCGCAGGC CTGA
 
Protein sequence
MGVVWAPRWP VVLRDDSLST PGGTLLLRRL RRADRDAWMD LRADNRDWLE RWEATTPEPT 
GRDRDGRYRG GWPGRTQETK PPSFTGYVRA LDRAAKDGST LPFAVELDGE LVGQLTVSSI
TYGSLCSASI GYWVGEHVAG RGVTPTAVAM AADHCFFELG LHRVEVNIRP ENVPSLRVVE
KLGLRDEGLR EAYLHIQGRW CDHRTFAVTA PEVPDGLLAR WRGAPQA