Gene Sked_30320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_30320 
Symbol 
ID8634666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3371473 
End bp3372711 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003315766 
Protein GI269796311 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.2094 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.165468 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCTCGA CCTCCTCGGT CCGCCGCAGC CGCCGCCCTG CCCGCTTCGT CGCGCAGGGC 
CTGGTGCTCG CGACCGTGCT CGCCGGGACC ACGGCCTTCA CCACGCTCCA CAGGACGGTG
ACGGTCGAGG TCGACGGCGT GGCCCACGAG GTCTCCGGCT TCTCGCGGAC GGTGGACGAC
GTCCTCGCGA GCAGCTCGCT CGACGTCGGT GCGCAGGACC AGGTCTTCCC GTCGCTCGAC
AGCCCGGTGG ACGACGGCGA CCTGGTCGTC GTCCGCACGG TCCGTGACGT GGAGGTGGAG
ATCGACGGCA CGAGCCAGAC CATCCAGTCC TCCGCGCGCA CCGTCGGCGA GGTCCTCGAC
GAGCTCGGCA CGCGCGCCGA CGGCGCCGAC GTGTCCGCCT CGCGCAGCGC CGAGGTCGGG
CGCGAGCCGC TGGTCATCAC CACGCCCAAG TCCGTCACCC TGGCCGTGGA CGGCCAGCAG
CTGGACATCT CCACCACCGA GGGCACCGTC CGCGACGTGC TCCTCACCGC GGGTGTCGTG
CTCGACGGCG AGGACACCGT CTCGGTCGAC CCGTCGCCGA CGACAGTGGC CGCCGCAGAG
TCCACCGCCG GGGCCACCTC CGCCGCTCTC GACGCCGAGA CGGTCGACGG CATGGTGCTG
ACCATCGGGC GGGGCGCCTC GGACATGTCG TCGGCGCAAG AGGTCCTGCC CTACGCGACG
CAGGAGGTCG AGGACCCGAC GGTCATCGCC GGAAGGACCG TCGTCACCCA GAAGGGCGTG
CTCGGCCAGG CCGTCACCAC CTACGACGTG ACCCTCGTCG ACGGGGTCGA GGTGGGCCGC
GAGGTCCTCG CCCGCCGCGT CACCGTCGAG CCGCAGGACG AGATCGTCTC GGTCGGCACG
CTCGAGCTCC CCGACCCCGC GCTCGTCGTC GTCGACCCGG GCTCGGCGAA GGCGATCGCC
CAGGTGATGG TCGCCGACCG CGGCTGGGGC GCCGACCAGT TCGCGTGCCT CGACTCGCTC
TGGCAGAAGG AGAGCAACTG GCGGGTCACG GCTGCCAACC CCTCGAGCAG CGCGTACGGC
ATCCCGCAGG CGCTCCCGGG CTCCAAGATG GCCAGCGCCG GCGCCGACTG GCAGACCAAC
GCCGAGACTC AGATCACGTG GGGCCTGGGC TACATCAGTG GCCGCTACGG CACGCCTTGC
GCCGCCTGGG CGCACTCCAA GGAGAAGAAC TTCTACTGA
 
Protein sequence
MTSTSSVRRS RRPARFVAQG LVLATVLAGT TAFTTLHRTV TVEVDGVAHE VSGFSRTVDD 
VLASSSLDVG AQDQVFPSLD SPVDDGDLVV VRTVRDVEVE IDGTSQTIQS SARTVGEVLD
ELGTRADGAD VSASRSAEVG REPLVITTPK SVTLAVDGQQ LDISTTEGTV RDVLLTAGVV
LDGEDTVSVD PSPTTVAAAE STAGATSAAL DAETVDGMVL TIGRGASDMS SAQEVLPYAT
QEVEDPTVIA GRTVVTQKGV LGQAVTTYDV TLVDGVEVGR EVLARRVTVE PQDEIVSVGT
LELPDPALVV VDPGSAKAIA QVMVADRGWG ADQFACLDSL WQKESNWRVT AANPSSSAYG
IPQALPGSKM ASAGADWQTN AETQITWGLG YISGRYGTPC AAWAHSKEKN FY