| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_30280 |
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| Symbol | |
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| ID | 8634662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | + |
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| Start bp | 3366008 |
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| End bp | 3367441 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | |
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| Product | putative efflux protein, MATE family |
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| Protein accession | YP_003315762 |
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| Protein GI | 269796307 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.155954 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAAGA ACCTCACCTC GGGCCGTCCC GCCACGATCA TCCTGCTCTT CACCCTGCCG
CTGCTGGTCG GCAACGTGTT CCAGCAGATG TACCACTTCG CCGATGCCTT CGTCGTCGGC
CGCATCATCG GCGTCGACGC GCTCGCCGCG GTCGGGTCGA CCGGCGGCAT CGCGTTCCTG
CTGCTCGGCT TCGCGATGGG CCTCACCGCC GGCTTCGCGA TCCCGACCGC CCAGGCCTTC
GGGGCCGCCG ACCTCCCGGG CGTCCGACGC TCGGTCGCAG CGGGCGCGAT CCTCACCGGG
GCCTTCGCGG TCGGGCTGAC CGCCGTCGCG GTCCCGCTCT CGCGCCCTCT CCTGGTGCTC
ATGCGCACCC CTCCCGAGAT CCTCGACGAC GCGCACCTGT TCATCGTCGT GTCGTTCTGG
GGCATCGGCG CGATCATGTT CTTCAACTTC CTGTCGAACA CGATCCGCGC GCTGGGCGAC
AGCCGCACAC CGCTGGTGTT CCTCGTGCTC TCGTGCCTGC TCAACGTGGT GCTCGTGGTC
GCCTTCATCG CCGGCCTGGG CATGGGGGTC GACGGCGCGG CCCTCGCGAC CATCACCTCG
CAGCTCGTCT CCGTGCTCCT CTGCCTGTAC CTGGTGCACC GCAAGATGCC CGTCCTGCAC
CTGAGCCGGG AGGACTGGCG CGTCACCCGC GCCGAGGTCA CCACACAGCT GCGCATCGGC
CTGCCGATGG CCTTCCAGGC GTCGATCATC GCCATCGGCA CCATCGTGCT CCAGTACGCG
CTCAACGGCC TCGGCGCCGA GGCCGTGGGT GCGTACACCG CCGCGCAGAA GGTCGACGGG
CTGGCCATGG CCCCGCTCGC GTCCTTCGGG CTCGCGATCG CCACCTTCAC CGCCCAGAAC
TACGGCGCCC GCTCCTACGG ACGCATCCGG ACCGGGGTCC TGCACACCTG CCTCATGTCG
ATCGGCTTCG CCCTCGCGAT CGGGCTGGGC AACGTCCTGC TCGGCCGGCA CCTCATCCGG
CTGTTCGTCG GCCCCGGCGA GGAGCACGTC GTCGAGCTCG GCCAGACCTT CCTCGTGGTC
AACGGCTCGC TCTACGTGGC CCTCGGGCTG CTCTTCGTGC TGCGCAACGC CCTCCAGGGC
ATGGGCCGCA CGCTCGTCCC GACGATCGCA GGCGTCGCCG AGCTCGTGAC ACGAGTCGGC
GCAGCCCTCC TCCTCGCCAC CCACCTCGGT TTCGTCGGGG TGTGCCTCGC AGCGCCCTTG
GCGTGGATCG CGGGCCTCGT GCCCGTGTGG ATCTCGTACC ACCGGTCGCG CCGCTGGCTC
AGCACCGAGG AGGCGCTGCT CGCGCAGGAC CGGCCCACGA CCCCGCCCGC TCCGCCGGTC
GAGACGGCGG AGTCGCTCGA CGAGGCGGCG GGCACCCGCA TCGCGGTCCC CTGA
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| Protein sequence | MSKNLTSGRP ATIILLFTLP LLVGNVFQQM YHFADAFVVG RIIGVDALAA VGSTGGIAFL
LLGFAMGLTA GFAIPTAQAF GAADLPGVRR SVAAGAILTG AFAVGLTAVA VPLSRPLLVL
MRTPPEILDD AHLFIVVSFW GIGAIMFFNF LSNTIRALGD SRTPLVFLVL SCLLNVVLVV
AFIAGLGMGV DGAALATITS QLVSVLLCLY LVHRKMPVLH LSREDWRVTR AEVTTQLRIG
LPMAFQASII AIGTIVLQYA LNGLGAEAVG AYTAAQKVDG LAMAPLASFG LAIATFTAQN
YGARSYGRIR TGVLHTCLMS IGFALAIGLG NVLLGRHLIR LFVGPGEEHV VELGQTFLVV
NGSLYVALGL LFVLRNALQG MGRTLVPTIA GVAELVTRVG AALLLATHLG FVGVCLAAPL
AWIAGLVPVW ISYHRSRRWL STEEALLAQD RPTTPPAPPV ETAESLDEAA GTRIAVP
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