Gene Sked_29910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_29910 
Symbol 
ID8634625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3320424 
End bp3321365 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content76% 
IMG OID 
ProductABC-type multidrug transport system, ATPase component 
Protein accessionYP_003315726 
Protein GI269796271 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.880888 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.697642 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACCA CCGCTCCCCC GCCCCGCACC CGAGCCGTCG AGGTCACCGG CCTGCGCAAG 
CGCTACGGCG CGCACCAGGC CGTCGACGGG CTCGACCTGC ACGTCGACCA CGGCGAGATC
GTCGCCGTCC TGGGCCCCAA CGGCGCGGGG AAGACCACGA CCGTCGAGAT CCTCGAGGGC
TTCCGCCGGG CCGACTCCGG CACGGTCCGC GTCCTCGGGG CGGACCCGGC CGGCGCGGGC
CGGGGGTGGC GGGACAGGAT CGGCGTGGTG CTGCAGGACT CCGACGACCT GCCCGAGCTC
ACAGCGCGCG AGATGGTCCG GCACTTCGCC CGGTACTACC GGGCACCGCG CGACCCGGAC
GAGGTGATCA CCGCCGTCGG TCTCGACGCG AAGGCGGGGG TCCGGGTGCG GGCGCTCTCC
GGCGGCCAGC GTCGGCGCCT CGACGTGGCG CTGGGCATCG TCGGCTCCCC CGAGCTGCTG
TTCCTCGACG AGCCCACGAC CGGCTTCGAC CCGCAGGCCC GCCGGTCCTT CTGGGAGGTG
GTCCGGTCCC TGCGGGCCGG CGGGACCACG ATGCTGCTCA CCACCCACTA CCTCGACGAG
GCGGCGGCCC TCGCGGACCG CGTGGTGGTC GTGGCCGGCG GCCGCGTGGT CGCGGAGGGC
CCGCCCGCCA CGCTCGGCGG GGCCGAGGCG AGGCGCCCCG TCGTGCACTG GACGCAGGAC
GGTACGGACC GCAGCGAGCG GACCTCGACG CCGACGGCGC TCGTGACGCA CCTCGCCGGA
CGCCTCGGGG GCGCCGACGG TGAGGTCCCG GGCCTGCGGG TGGAGACCCC GACGCTCGAG
GACGTCTACC TCGAGCTCGT GTCGGCACAG ACCGGCGCCG CGACCCAGAC GGCCCAGCAC
ACCCCGCTCA CCCAGCACTC TCCCGAGGAG ATGACGTCAT GA
 
Protein sequence
MSTTAPPPRT RAVEVTGLRK RYGAHQAVDG LDLHVDHGEI VAVLGPNGAG KTTTVEILEG 
FRRADSGTVR VLGADPAGAG RGWRDRIGVV LQDSDDLPEL TAREMVRHFA RYYRAPRDPD
EVITAVGLDA KAGVRVRALS GGQRRRLDVA LGIVGSPELL FLDEPTTGFD PQARRSFWEV
VRSLRAGGTT MLLTTHYLDE AAALADRVVV VAGGRVVAEG PPATLGGAEA RRPVVHWTQD
GTDRSERTST PTALVTHLAG RLGGADGEVP GLRVETPTLE DVYLELVSAQ TGAATQTAQH
TPLTQHSPEE MTS