Gene Sked_29620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_29620 
Symbol 
ID8634596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3294614 
End bp3295183 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content64% 
IMG OID 
ProductLSU ribosomal protein L5P 
Protein accessionYP_003315698 
Protein GI269796243 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.787751 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCG AGACGTACGC GAAGGCACAG CCTCGCCTCA AGGCCCGCTA CGCCGCGGAG 
ATCCTCCCGG CGCTCCACGA GGAGTTCTCG CACGAGAACG TCAACCAGGT CGCCGGTCTC
ACGAAGATCG TCGTCAACAT GGGTGTCGGA GACGCTGCGA AGGACGCCAA GCTGATCGAG
GGCGCCATCC GCGACCTCAC GGCCATCACC GGTCAGAAGC CGCAGGTCAC GAAGGCCCGC
AAGTCGATCG CCCAGTTCAA GCTGCGTGAG GGTATGCCCA TCGGCGCCCA CGTCACGCTG
CGTGGCGACC GCATGTGGGA GTTCGCCGAC CGTCTGCTGT CGATCGCGCT CCCGCGTATC
CGTGACTTCC GTGGGCTCTC GCCCAAGCAG TTCGACGGTC ACGGCAACTA CACGTTCGGT
CTGAACGAGC AGTCCATGTT CCACGAGATC GACCCCGACA AGGTCGACCG CGTTCGCGGT
ATGGACATCA CCATCGTGAC GACCGCGACC ACCGACGCTG AGGGCCGTTC GCTCCTGAAG
CGTCTCGGCT TCCCCTTCAA GGAGCTCTGA
 
Protein sequence
MSTETYAKAQ PRLKARYAAE ILPALHEEFS HENVNQVAGL TKIVVNMGVG DAAKDAKLIE 
GAIRDLTAIT GQKPQVTKAR KSIAQFKLRE GMPIGAHVTL RGDRMWEFAD RLLSIALPRI
RDFRGLSPKQ FDGHGNYTFG LNEQSMFHEI DPDKVDRVRG MDITIVTTAT TDAEGRSLLK
RLGFPFKEL