Gene Sked_28250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_28250 
Symbol 
ID8634459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3154986 
End bp3156110 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content74% 
IMG OID 
Productuncharacterized MccF-like protein (microcin C7 resistance) 
Protein accessionYP_003315561 
Protein GI269796106 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATCC GATACCCGCG CCCGCTGCGT CCCGGCGACA CCGTCGGGGT GACGGCCCCC 
TCGAGCGGCG TCGGCGAGCA GCACCGCGGA CGCCTCGACC ACGCCGTCGC CTGGCTGCGG
GCCCAGGGGT ACGAGGTCGA GCTCGGCGCC TGCCTGGACG GGGCGTCGCA CGTCAGCGCG
CCGGTGCACG AGCGGGCGGC CGAGCTCCAG CGGATGCTCA CCGACCCGCG GGTCCGTGCG
GTGGTCCCGC CATGGGGCGG GGAGACCGCG ATCGACCTGC TCCCCCACCT CGACCTCGAC
GCCATCGCCG CCGCCGAGCC GACCTGGGTG GTGGGGTTCT CCGACATCTC GACGATCCTC
ACGCCGCTGA CACTGCTGAC CGGCTGGGCC ACCGTGCACG GCACCAACCT CATGGACAGC
CCCTACGAGG TGCCCGCTCC CCTGCTGTCG TGGCTCGACG TGGTCACCGC GCCGGCGGGG
TCGACGCTGC GGCAGTCGAG CCCGGGCGTG CACCGCGCGA CGGGCTGGGA CGACTGGACC
GTCGACCCGA CCGTGTCCCA GCACACCTGG GACGGGACCG GGGGTTGGCG GCGGATCGAC
GCGGGCGGTG CTGCTGGTGG CAGTGGTGAG GCTGGGGCTG GGGTTGGTGA AGCTCGTGAC
GGGGCTGAGG TGAGGAGCGG GGGCGAGGGC GAGGCGTTCG AGGTCACCGG GCGGATCGTC
GGGGGCTGCA TCGAGACGCA GTCGGGGATC GCCGGGTCGC GGTACGGGCG CACCGGGGCG
CTCCGCGGGG CTGGCGGAGC GGGTGGCGCG ACGGACGACC TGATCGTCTA CGTGGAGGCT
GCTGGCGACG ACGCGCTGTC GATCTGCCGG CGCCTGCACG GCATGCGGCT CGCGGGGTAC
TTCGACGGTG CGGTCGCCGT GCTCGTCGGC CGGACGAAGG CACCGGACTC CCCCACCCTC
ACCCAGACCG AGGCGGTGCT CGACGCTCTC GGGACGCTCG GCGTCCCGAT CGTCGCCGAC
GTGGAGTGCG GTCACGTGCC GCCGTACCTG CTGCTGGTCA ACGGTGCCCT GGGGCGGCTG
GTGTGGAGCG AGAGCGAACG GTTCCTGGAG CAGGCGCTGG TCTGA
 
Protein sequence
MEIRYPRPLR PGDTVGVTAP SSGVGEQHRG RLDHAVAWLR AQGYEVELGA CLDGASHVSA 
PVHERAAELQ RMLTDPRVRA VVPPWGGETA IDLLPHLDLD AIAAAEPTWV VGFSDISTIL
TPLTLLTGWA TVHGTNLMDS PYEVPAPLLS WLDVVTAPAG STLRQSSPGV HRATGWDDWT
VDPTVSQHTW DGTGGWRRID AGGAAGGSGE AGAGVGEARD GAEVRSGGEG EAFEVTGRIV
GGCIETQSGI AGSRYGRTGA LRGAGGAGGA TDDLIVYVEA AGDDALSICR RLHGMRLAGY
FDGAVAVLVG RTKAPDSPTL TQTEAVLDAL GTLGVPIVAD VECGHVPPYL LLVNGALGRL
VWSESERFLE QALV