Gene Sked_28140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_28140 
Symbol 
ID8634448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3142997 
End bp3144616 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content75% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003315550 
Protein GI269796095 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGGTG TGAACCGTGG ACCTCGCAGC GACGACCCGA CCAGCGGCCG CCCCGTCGGC 
GTGCGTCGGA CGCTCGAGCA GGACACCACG ACCCGCTCCG ACGGGCCCTC GTCGCTCGGT
GGCCCCTGGG TGTCGGGCGT CCTCGGCGCG ATCCAGGCGG TCGTGTTCTC CCTCGCCGTC
GTCGTCGTCC CCGCGATCGC GATGGCCGTC GCGGCCAACG CACAGCTGAG CGCCAGCACG
TCGGGCTGGA CCGCAGCGGT GCCCGTCGCG TCGCGGCTCT GGCTCCTCGG GCACGGCGTC
CCGCTGGTGA CCGGGATCGC GACCGTCACC ATCGTCCCGC TCGGGATCAC CGCAGCCGCG
GTGTTCGCCG TCTTCGTGTC GGCCCGACGG ACGATCGTCC CCACCCGGTC CGCCTTCTGG
TCGGCCGCGG CGACCTACAC CGTCGGCACG CTGCTCGTCG CCGTCTCGAC CGGGTCGACG
AGCGGGCTCC AGCTCACCTC GGCAGCCCTG GGTGGGCTCG CGGTCGCGCT CGTCGGGCTG
TGCTGGGGGC TGCTCACCGG ACCAGAGCCG GGGCCGCTCG CCGACCGCGC GGCGGTGCTC
GCCGCACGGC TGCCCCAGGT CGTCCGTGAC GGTGCCCGCG GCGCCGCCAC CGCTGCTGCG
GTCGTCGCGC TGCTCTCGGG CCTGCTCACC CTGCTCTGGG TGATGATCGG CTGGTCGACG
GTCGGAGACG TCCTGAGCGA CCTGCGGCTC GACGCCGCCA GCAGCATCTC CCTGGGCATC
GCCCAGCTCG CGCTGCTGCC CAACCTCGCC GTCTTCGCCG GGACCTGGAT CGCCGGTCCC
GGGTTCGCCG TGGGCTCCGG CACGCACTTC GGGCCCGATC TCGTCACCTC GGCGCCGCTG
CCCGCCATCC CGCTGCTCGG AGCGCTCCCC GCGCCGTCCG CCGGCGGCGG GGTCGGTGTC
TGGGCGCCGG TCCTCGTCGG GGTCGCCGGT GTGGTCGGCG GCTGGGTCGC CAGCCGTCGG
ACCGAGCACA TGCTGTGGTG GCACACGGTC GTCGTCGCCG GGCTGGTCGG TACGGGGGCG
GGCGTGGCCG CCGGGACCAT GGTCGCGCTC GCCTCGGGCG TCGCCGGCCC TGGGCGGCTG
GCCGACGTCG GGGCCTCGCC GGTCTACCTC GGAGCCTGCG TCGCAGCCCA GGTGGGTGCC
GGTGCGCTGC TCGTCCTGCT CGTCACCCGC GCCGAGGTGC ACGCGGCACT CGCCTCGGCC
TGGCGGTCGA TGCGGTCGCG CCGGAGAGAG GGCGCGGGTG GCGAGCGCGC CGCAGCGGGG
GACGGCTCAC CTGACAAGGC CGGGGCTGAC AAGGCTGGAG CAGACAAGGC TGGAGCAGAC
AAGGCCGGAG CCGACAAGGC CGGAGCGTGC ACGGCACCGG CAGACTCGTC AGCAGCGGCA
GAGACCGCCG GGGGCACGCC TGCGCCGTCT CGTGCGGGCG CACCGTCGAC GTCGGGGACG
GTCTCCGAGC CTGGCAGCGC CAGCAAGACC ACCGCGACCA GCTCCGTCCC GAAGGCGTCA
GGCGCGTCGA CCACCGCCAC GCCCTCCGAC GACGCTCAGC GGGCGAGCGA CGACGTGTAG
 
Protein sequence
MVGVNRGPRS DDPTSGRPVG VRRTLEQDTT TRSDGPSSLG GPWVSGVLGA IQAVVFSLAV 
VVVPAIAMAV AANAQLSAST SGWTAAVPVA SRLWLLGHGV PLVTGIATVT IVPLGITAAA
VFAVFVSARR TIVPTRSAFW SAAATYTVGT LLVAVSTGST SGLQLTSAAL GGLAVALVGL
CWGLLTGPEP GPLADRAAVL AARLPQVVRD GARGAATAAA VVALLSGLLT LLWVMIGWST
VGDVLSDLRL DAASSISLGI AQLALLPNLA VFAGTWIAGP GFAVGSGTHF GPDLVTSAPL
PAIPLLGALP APSAGGGVGV WAPVLVGVAG VVGGWVASRR TEHMLWWHTV VVAGLVGTGA
GVAAGTMVAL ASGVAGPGRL ADVGASPVYL GACVAAQVGA GALLVLLVTR AEVHAALASA
WRSMRSRRRE GAGGERAAAG DGSPDKAGAD KAGADKAGAD KAGADKAGAC TAPADSSAAA
ETAGGTPAPS RAGAPSTSGT VSEPGSASKT TATSSVPKAS GASTTATPSD DAQRASDDV