Gene Sked_28000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_28000 
Symbol 
ID8634434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3123374 
End bp3123901 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content69% 
IMG OID 
Productacetyltransferase (GNAT) family protein 
Protein accessionYP_003315536 
Protein GI269796081 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0943003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACC TAGACATCAC GATCTCACTG GTGACCGACG AGCACGCGGG CGAGCTGCTC 
ACCCTGCGCC GTGCCGCGTT CGTCACGGAG GCCCAGGTCT ACGGCGACCC CAACATCCCG
CCGCTGACGC AGACCCTCAG CGAGCTGCGC GCCGACCTCG TCGCCGACGG CGTCGTGACG
CTCGGTGCCT GGTCCGGCCA CCGTCTCGTC GGGTCCGTGC GCGTCGAGAT CGAGGACGAC
AAGGCGACCC TCGGGCGCCT CGCCGTCGCC CCCGACCTGC AGGGCAAGGG CATCGGCACG
CAGATGATGT TCGCCGTGCT GCCGCACCTG CCCGAGGAGA CCACCGAGAT CTGGGTCTTC
ACCGGCAAGG ACTCGAAGCA GAACCTCGCG ATGTACCAGA AGGCCGGCTA CGAGCACCAG
CACGACCAGG TGGCCGGAGA CCTCACCTAC GCCTACCTGC GCCGCATCCT CGGCGAGATG
GACGACTCCG ACGTCCAGAC CGACGCGGAG CCGACGCACT CCGCCTGA
 
Protein sequence
MSDLDITISL VTDEHAGELL TLRRAAFVTE AQVYGDPNIP PLTQTLSELR ADLVADGVVT 
LGAWSGHRLV GSVRVEIEDD KATLGRLAVA PDLQGKGIGT QMMFAVLPHL PEETTEIWVF
TGKDSKQNLA MYQKAGYEHQ HDQVAGDLTY AYLRRILGEM DDSDVQTDAE PTHSA