Gene Sked_27540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_27540 
Symbol 
ID8634388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3067459 
End bp3067863 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content71% 
IMG OID 
ProductTranscription factor WhiB-like protein 
Protein accessionYP_003315490 
Protein GI269796035 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGCCTA CCACGCTGCT CGACACGATG TCACAGGGCG GGTCCGGGGC CTGGGCGCGA 
CCCAGCACCA CCCAGGAGCC GACGCACGAC CAGGCGACCG TCCGCGGGGA CGCTCGACCT
GCAGCAACAC TCACCCAGAC CGAGGGCAGG GAGTTCGACG AGCTCGTCGC CGGGCTCGTC
CCCTGCCGCA ACAACGACCC CGAGCTCTGG TTCGCCGAGC AGTCGACCCA GGTCGAGCAG
GCGAAGGCCC TCTGCAAGGA GTGCCCCCTG GTGGCCGCGT GCCTCACCGG CGCGGTCGAC
CGCGCCGAGC CGTGGGGTGT CTGGGGTGGA GAGGTCTTCG TCGACGGCGT CGTCGTCGCG
AAGAAGAGAG GGCGGGGACG TCCCCGCAAG AGCGAGGTGC TGTGA
 
Protein sequence
MRPTTLLDTM SQGGSGAWAR PSTTQEPTHD QATVRGDARP AATLTQTEGR EFDELVAGLV 
PCRNNDPELW FAEQSTQVEQ AKALCKECPL VAACLTGAVD RAEPWGVWGG EVFVDGVVVA
KKRGRGRPRK SEVL