| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_27490 |
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| Symbol | |
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| ID | 8634383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | - |
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| Start bp | 3061819 |
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| End bp | 3063006 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | predicted secreted protein containing a PDZ domain |
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| Protein accession | YP_003315485 |
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| Protein GI | 269796030 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCAGCA AGAAGAACAC CACCCCCCAG CCCCCGGTGC AGCCCTCCGA GCACGGCTCG
GGTCAGCCCG GCGACGGTCG GGAGAGCGCC CTCGAGCGCA ACCTCCGCGA GCCCTACGCC
CTCCCGGGCC GTGAGCGACC GTCAGCGCGC TCGGTGACTC TCGGGATCTC CTTCATGGTG
ACGGTCCTGC TGCTCTCGGG CCTCGCCGTC CTGCCCTCCC CGTACGCCGT GAGGTCTCCG
GGCCCCACCC GCGACACCCT CGGCCAGGTG GACGGCACCG ACCTCATCGA GATCACCGGC
GCGACCACCT ACGAGTCGAC CGGTGAGCTG CGCCTGACGA CGGTCGGGGT GAGCGGTGGC
CCGGGCTATC CCGTGAACCT CGCCCAGGTG GTCCAGGGCT GGCTCGACCC GACGCGCGTC
GTCGCCCCGG TCGAGACGGT GTTCCCCCCG TCCGTCTCCC GGGAGGAGCT GGACGCGCAG
AGCTCTGCCG AGATGACGTC GTCGCAAGAG ATGGCCACCT ACGCCGCGCT CACCGAGCTC
GGGTACGACG TGCCCGTGAC GATCACCGCG GTCGAGACCG TCGAGGGCTC GGGAGCCCGC
GGCGTCGTCG AGGACGGCGA CGTCATCGCG TCCTTCGACG GTGACGCCCT CGTCTCGTCC
GAGGACCTGC TCGACCGCCT CGCCAGCACC GCCCCGGGGA GCGACGTGGT CCTCGGGATC
GTCCGCGACG GCTCGCCGTC CGACGTCACG GTGACGACCA CGGACCCCGG CGACGGCTCC
GACGGGTCTC GCCTGGGTGT CGTGGTGCAG AGCAGCTTCG ACTTCCCGGT CGACGTGAGC
ATCCAGATCG ACAACATCGG CGGCCCGAGC GCCGGGACCA TGTTCGCGCT CGGCATCATC
GACCGGATGA CGCCCGAGGA CGAGGTGAAC GGTCAGGTGA TCGCCGGGAC CGGGACCATG
GACCTCGCGG GCCAGGTGGG CCCCATCGGC GGGATCCGTC AGAAGCTCGA CGGCGCGCTC
CGCGACGGGG CCACGTGGTT CCTCGCCCCC GCGGACAACT GCGAGGAGGT CGTCGGGCAC
GTGCCCGACG GGCTCCAGGT CGCGAAGGTC TCCACCCTTG CCGAGGCGCG TGCCGCGATG
GTCGCGATCG GCGCCGGCGA GGGCAGCACG CTGCCGACCT GCTCCTAG
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| Protein sequence | MRSKKNTTPQ PPVQPSEHGS GQPGDGRESA LERNLREPYA LPGRERPSAR SVTLGISFMV
TVLLLSGLAV LPSPYAVRSP GPTRDTLGQV DGTDLIEITG ATTYESTGEL RLTTVGVSGG
PGYPVNLAQV VQGWLDPTRV VAPVETVFPP SVSREELDAQ SSAEMTSSQE MATYAALTEL
GYDVPVTITA VETVEGSGAR GVVEDGDVIA SFDGDALVSS EDLLDRLAST APGSDVVLGI
VRDGSPSDVT VTTTDPGDGS DGSRLGVVVQ SSFDFPVDVS IQIDNIGGPS AGTMFALGII
DRMTPEDEVN GQVIAGTGTM DLAGQVGPIG GIRQKLDGAL RDGATWFLAP ADNCEEVVGH
VPDGLQVAKV STLAEARAAM VAIGAGEGST LPTCS
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