| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_27200 |
|---|
| Symbol | |
|---|
| ID | 8634354 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 3027646 |
|---|
| End bp | 3028461 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_003315458 |
|---|
| Protein GI | 269796003 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0677925 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.469138 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCCAGCA CCTCACGCGA AGACGGACCT CGCGACGACG CCTCACACGA CGACGCAGCG
GCACCGACCT CCTCCCCCAT GGGCAGCGTC GACAAGGCCT TGCTCGCGCT CCAGGAGCTC
AGCGCGGCCG GGGCCGACGG CATCGCCCTC CACGACCTGG CCCAGCGGCT CGGCCTCAAC
AAGACCTCGT TGCACCGCAC CCTCGCGGCT CTGCGCTTCC GCGGCTTCGC GGACCAGGAC
CCGGCCAGCG GCAGCTACGT GCTCGGACCG GCGGCCACGG CCCTCGCCAC GAGCTATCAC
GCCGACGAGA ACCTGCCCCG CCTCATGCAG AACGCCCTCA CGGCCCTGTG CGCGCTCACC
GACGAGCTCG TCCACCTCGG CGTGCTGTCC GGCGCGGAGA TCCTCTACCT CGACAAGGTC
GAGCCCGCCC GACCCGTCAG GGTGTGGTCT GCCGTCGGGC GCCGGCAGCC CGCCGCGACC
ACGGGCCTCG GGCGCGCGAT CCTGTCCCGG CGCACCGTCG ACCCCGCGTC GCTCGCCTGG
TTCGCCGGCG ACCGGCTGCC GGCGGACCGG CTCGCCGGGA TCCTCGCGGC GGCCCGCGCC
GACGGCTACG CGACCGAGAC CGAGGAGAAC GAGGTGGGCA TCAGCTGCCT CGCCGTCCCG
CTGCTGCGAG ACGGCGCGGC GATCGCCGCC GTCTCGATCA CCGCCCCGTC CGACCGCATG
ACCCCTGCCC GGCGCACCGC ACTGGCCGCG ACGGTCGCCC GCGAGCTCCC GGCGCTGCTG
CCCGCCGGCG TGTCGCTGCC TGCAGAGCTC GGATGA
|
|---|
| Protein sequence | MPSTSREDGP RDDASHDDAA APTSSPMGSV DKALLALQEL SAAGADGIAL HDLAQRLGLN
KTSLHRTLAA LRFRGFADQD PASGSYVLGP AATALATSYH ADENLPRLMQ NALTALCALT
DELVHLGVLS GAEILYLDKV EPARPVRVWS AVGRRQPAAT TGLGRAILSR RTVDPASLAW
FAGDRLPADR LAGILAAARA DGYATETEEN EVGISCLAVP LLRDGAAIAA VSITAPSDRM
TPARRTALAA TVARELPALL PAGVSLPAEL G
|
|---|
| |