Gene Sked_27170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_27170 
Symbol 
ID8634351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3025131 
End bp3025625 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003315455 
Protein GI269796000 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.730577 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.440149 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCAGG ACCAGATCCC CGCCACCGGC GAAGAGCGTC GCGTCCAGGA GGCCGCACAG 
GACGAGACCG AGCAGCGTGA GCTCGACGCC CTGCACACCG TGCGCGGAGA CACCAGCGTC
GCCGAGGGCG TCGTCGCGAA GATCGCCGGC ATGGCGACCC GCGAGGTCCC CGGCGTCTAC
GCGATGGGCA ACGCCGCACG CCGTGCCGTG AACGCCCTCG CCCAGCGCAT CCCCGGCAGC
CAGACCAACG TCACCGGCGG AGTCTCCGTG GAGAAGGGCG ACGCCCAGAC CGCGATCGAG
ATCGCGATCG TCCTCGACTA CGGCGAGTCC GTCGTCCAGG TCAGCGAGCA GATCCGCGAG
AACGTCATCC AGGCCGTCGA GTACGGCACC GGCCTCGAGG TCGTCGCCGT GAACATCAAC
GTCACCGACG TGCACCTCCC GGACGACGAC GCGGAGGAGA CCTCCTCCTC GTTCGAGTCG
ACCGAGCTGC GCTGA
 
Protein sequence
MSQDQIPATG EERRVQEAAQ DETEQRELDA LHTVRGDTSV AEGVVAKIAG MATREVPGVY 
AMGNAARRAV NALAQRIPGS QTNVTGGVSV EKGDAQTAIE IAIVLDYGES VVQVSEQIRE
NVIQAVEYGT GLEVVAVNIN VTDVHLPDDD AEETSSSFES TELR