| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_26580 |
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| Symbol | |
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| ID | 8634292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | + |
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| Start bp | 2962569 |
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| End bp | 2963228 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | |
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| Product | LysM domain-containing protein |
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| Protein accession | YP_003315396 |
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| Protein GI | 269795941 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0191471 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.545642 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCAC CGGAGAAGGC CTTCATCGAG ATCGAGGGCG GCACCCGAGT CCCGTGCCTG
TTCAACCCGG CCCAGCTCAC CATCAGCCGG CGCAACCGGT GGACGGGCAA CCCCGTCGCC
GGACGGGGCG TGCCCACGCT GCGCTACGCC GGCGCGATGC CCGGCAGCCT GTCCGTGGAC
CTCTTCTTCG ACACCACGTC GACCGGGACG TCGGTGGCCG AGCACACGAG CAAGATCCTC
GCGATGATGG ACATCGACAC GTCGCTGCCC GGCACGGACG AGTCCACCAA CAACGCACGC
CCGCCGTACC TCACCTTCCA CTGGGGCGAC ACGCACTCCT TCAAGGCCGT CGTCGCGGAC
CTCGCGCTCA CGTACACGTA CTTCTCGACG ACCGGCATGC CGCTGCGCGC CTCGCTCGCC
CTCGTGCTGC AGCAGTACGA GGCGGTCGAC TCCTACGGCC CGCAGAACCC GACGTCGGGG
ACCCCGCAGC CGCACCGGGT GCACCGGGTG CTCGCGGGCG AGACCCTCGA CCGCATCGCG
GCCCGCTACT ACGGTGACGC CACGCGCTGG CGGACCCTCG CCTCGGCCAA CACGGTCTCC
GACCCGCTGT CGCTGCGGCC CGGGTCGCTG CTGTCCGTGC CACGGCTCGA GGACGTCTGA
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| Protein sequence | MSAPEKAFIE IEGGTRVPCL FNPAQLTISR RNRWTGNPVA GRGVPTLRYA GAMPGSLSVD
LFFDTTSTGT SVAEHTSKIL AMMDIDTSLP GTDESTNNAR PPYLTFHWGD THSFKAVVAD
LALTYTYFST TGMPLRASLA LVLQQYEAVD SYGPQNPTSG TPQPHRVHRV LAGETLDRIA
ARYYGDATRW RTLASANTVS DPLSLRPGSL LSVPRLEDV
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