| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_26390 |
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| Symbol | |
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| ID | 8634273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | + |
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| Start bp | 2937862 |
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| End bp | 2939349 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | |
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| Product | arabinose efflux permease family protein |
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| Protein accession | YP_003315377 |
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| Protein GI | 269795922 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.095972 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCG CTCCACCCGC CCCCGCCGCC ACGACGGAAG AGGGCACCGC AGCACCTGCA
CCCACCCTGC AGAAGGACGC CCCCGCGACG ACGGGCAGCG CCAGCGCCAC CGACGACGGC
AACCGCGCCC GCCGCCCCGC GCTCTCCCCG ATGTTCGTCG GCATGATCGC GCTGGTCTCC
CTCGGCGCCT TCGAGTCGCT GGCCGTGTCG ACCGCGATGC CGGTCATCGC CGCGTCCCTC
GACGGGCTGG CCCTCTACGC ACCGGCCTTC GCGCTCACCA TCGCGACCTC GGTCATGGGC
ATGGTCCTCG CGGGTCGCTC GACCGACCGC GGGACCGTCG GCCCCTCACT GCTCGGCGGG
GTCGGCGTGT TCGTCGCCGG GCTGCTGCTC GCCGGGCTCG CCCCGTCCAT GGGTGTGCTG
CTCGTGGGCC GCGCGCTCCA GGGGCTCGGC TCGGGCGCCT ACATCGTGGC GCTCTACATG
ATCGTCGCGC GGCAGTACTC GGGCCGGGCG CGCGCGGGCG TGCTCGCGGC CTTCTCGACC
GCGTGGGTGG TCCCGTCGCT CGTCGGCCCC CTGCTCGCCG GCCTGGTGGT GAGCCACCTC
GGGTGGCGGT GGGTGTTCCT GTCCGTGGCG GTCCTCGCCG TGCCGGCGAC GCTCATGCTG
GTCTCCGCGG TGCGGGACAG CGCCCGGACG GCCACGACCG CCGGCGAGGA CCCGGCCGCT
CCCCCGGCCG GCGGCCCTGC CGCACGACGC GGCGCCCTCT GGTGGGCCGC CGCAGCCAGC
GCCGGGGTCG CCCTCATGTC GCTGGGCACC GAGAACCACA GCACGGCCGG CTACACGATG
ATCGTGCTCG GCGCGGTCGT GGTCCTCTGG GCCGCTCCGC GCCTGCTGCC GCGCGGCACG
CTCCGAGCCG GTCGCGGCCT GCCGACGGTC ATCGCGCTGC GCGGGCTCGT CGCGTCGTCC
TTCTACGCCG CTGAGGTCTT CCTGCCACTG ATCCTGCAGC AGGAGCGCGG CTTCAGCCCG
GCCCGCTCGG GGATCGTGCT GACCGCCGGC GCGATCACCT GGGCGCTCGG CTCGCTCCTG
CGCAGCCGGC TCACGTGGTC GTCGGCGACC TTCCTGCGGC TCGGGACCTG GTTGGTGGCC
CTGGCCGTCG CCGGGGTCGC GCTGCTCGTC GTCCCGTCGG TCCCGGCCGA GCTCACGTAC
CTCGCGTGGG CGGCTGGTGG GCTCGGGCTC GGGATGGTGT TCCCGACGCT CGCCATCCTC
GTCTTCGACC TCTCGCCCAC CCACCAGCAG GGCTCGAACA CCTCGTCGCT CCAGGTCGCC
GACGCCCTGA GCAGCGCGTT CCTGCTGGCG CTCGCCGGCA TCGTCATCGC CTGGCTCGTG
CCGAACATGG GCAGCTACGG GTACCTCGGT GCCTTCGTGC TCGCGGGAGC CGTCGCGCTC
GTCGCCGCGG TGATCGCGCC GCGCGCGACG CAGACCACGG TCGGCTGA
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| Protein sequence | MTTAPPAPAA TTEEGTAAPA PTLQKDAPAT TGSASATDDG NRARRPALSP MFVGMIALVS
LGAFESLAVS TAMPVIAASL DGLALYAPAF ALTIATSVMG MVLAGRSTDR GTVGPSLLGG
VGVFVAGLLL AGLAPSMGVL LVGRALQGLG SGAYIVALYM IVARQYSGRA RAGVLAAFST
AWVVPSLVGP LLAGLVVSHL GWRWVFLSVA VLAVPATLML VSAVRDSART ATTAGEDPAA
PPAGGPAARR GALWWAAAAS AGVALMSLGT ENHSTAGYTM IVLGAVVVLW AAPRLLPRGT
LRAGRGLPTV IALRGLVASS FYAAEVFLPL ILQQERGFSP ARSGIVLTAG AITWALGSLL
RSRLTWSSAT FLRLGTWLVA LAVAGVALLV VPSVPAELTY LAWAAGGLGL GMVFPTLAIL
VFDLSPTHQQ GSNTSSLQVA DALSSAFLLA LAGIVIAWLV PNMGSYGYLG AFVLAGAVAL
VAAVIAPRAT QTTVG
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