Gene Sked_25600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_25600 
Symbol 
ID8634194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2844639 
End bp2845358 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content74% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003315298 
Protein GI269795843 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.52807 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACGT CGCCGCGCCA CCAGCCGTCA CCCCAGCAGC CTGCCCAGCA CCCGGCAGGC 
CAGAGCCAGC CCGGCTCCCA GCCTCCGGGC ACGGCGCCCG GCGTCCAGGT GCCGGAGGGC
TACGTCCTCG CACCCGCCCC GCGCAAGAAG CGCTTCGTGC GGCGCCACCC CGTCCTCACC
CTGGTCGGCC TCGTCGTCGC GGTGGTCGTC GTCGTGCAGC TGGCGGGCGG CTCGGGCGAG
GTGGCACCGG CATCGCCCGG GCCGTCGTCC GGTGCCTCGG ACGCCGGTGA GCCGGGGACG
GACGCGGCTC CCGCAGAGGA CGCCCCGGCC GGCGTCGGCA CACCGGTCGC CGACGGAGCC
TTCGAGTTCG TCGTCACCGG TGTCGAGCCG GGCGTCGCAC GGGTCGGTGA CGAGATGTTC
GGCGCCGACG CCCAGGGGCA GTTCGTGCTC GTGCGCGTCA CCGTCACCAA CGTCGGAGAC
TCGGCGCAGG TCTTCGACGC GAGCGCGCAG TCGCTCGTCG ACGGTCAGGG CCGGACGCAC
TCGGCGGACT CGGGAGCGGC GATCTACCTC CCCGACGCCA ACAGCTTCCT CACGAGCGTC
AACCCCGGGA ACACGGTCGA CGGGATCGTC GTCTTCGACA TCCCGGCCGA CGCGACGCCG
GCCTCGGTCG ATCTCCACGA CTCGCTGTTC TCCGGTGGGG TCACCGTCGC CCTCGGGTGA
 
Protein sequence
MATSPRHQPS PQQPAQHPAG QSQPGSQPPG TAPGVQVPEG YVLAPAPRKK RFVRRHPVLT 
LVGLVVAVVV VVQLAGGSGE VAPASPGPSS GASDAGEPGT DAAPAEDAPA GVGTPVADGA
FEFVVTGVEP GVARVGDEMF GADAQGQFVL VRVTVTNVGD SAQVFDASAQ SLVDGQGRTH
SADSGAAIYL PDANSFLTSV NPGNTVDGIV VFDIPADATP ASVDLHDSLF SGGVTVALG