Gene Sked_25380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_25380 
Symbol 
ID8634172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2819830 
End bp2820264 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003315276 
Protein GI269795821 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.606308 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.623605 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTACT CGTTCCAGGT CACCGTCGAC GCCGCCGCTC CGCACCCCCT CGCCGACTGG 
TGGGCGCAGA CCCTCGGCTG GGCCGTCGAG CCGAGCGACG AGGCCTTCAT CCGGTCGATG
ATCGAGCAGG GCCACGCGAC CGAGGCCGAC ACGACGACCC ACGCCGGGGC CCTGGTGTGG
AAGGAAGGGG CCGCGATCAG CCTCCCTGAC GCCCTGCCGG GCACGCCGCG GGTGCTGTTC
CAGCTGGTCC CCGAGGCCAA GACGGTCAAG AACCGGGTGC ACCTGGACGT GCGCGTCGGC
GAGGACGACC CGGAGGCGGT GCGCGCAGCC CTCGAGGCCC GTGGCGCGAC CTTCCTGCAC
ACGGCCTCGC AGGGGCCGCA CACCTGGGTG ACGATGGCCG ACCCGGAGGG CAACGAGTTC
TGCGTCAGCC GCTGA
 
Protein sequence
MGYSFQVTVD AAAPHPLADW WAQTLGWAVE PSDEAFIRSM IEQGHATEAD TTTHAGALVW 
KEGAAISLPD ALPGTPRVLF QLVPEAKTVK NRVHLDVRVG EDDPEAVRAA LEARGATFLH
TASQGPHTWV TMADPEGNEF CVSR